RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 PSMB6P28072 239 aa15.52■□□□□ 0.07
COL9A3-205ENST00000466192 PIGPP57054 158 aa15.52■□□□□ 0.07
COL9A3-205ENST00000466192 TMPRSS3P57727 454 aa15.52■□□□□ 0.07
COL9A3-205ENST00000466192 OR8G1Q15617 311 aa15.52■□□□□ 0.07
COL9A3-205ENST00000466192 PRR30Q53SZ7 412 aaPredicted RBP15.52■□□□□ 0.07
COL9A3-205ENST00000466192 IGSF11Q5DX21 431 aa15.52■□□□□ 0.07
COL9A3-205ENST00000466192 COMMD7Q86VX2 200 aa15.52■□□□□ 0.07
COL9A3-205ENST00000466192 SGPP2Q8IWX5 399 aa15.52■□□□□ 0.07
COL9A3-205ENST00000466192 OR8G5Q8NG78 346 aa15.52■□□□□ 0.07
COL9A3-205ENST00000466192 RAXQ9Y2V3 346 aa15.52■□□□□ 0.07
COL9A3-205ENST00000466192 A0A0D9SG52 128 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 MLNRO43193 412 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 SPDEFO95238 335 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 HOXB5P09067 269 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 FABP6P51161 128 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 ZNF83P51522 516 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 NAAAQ02083 359 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 ALKBH2Q6NS38 261 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 C5orf24Q7Z6I8 188 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 LINC00596Q86U02 117 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 GALNT11Q8NCW6 608 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 SNRNP40Q96DI7 357 aaKnown RBP15.51■□□□□ 0.07
COL9A3-205ENST00000466192 OR10C1Q96KK4 312 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 TMEM100Q9NV29 134 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 CHD3Q12873 2000 aaKnown RBP15.51■□□□□ 0.07
COL9A3-205ENST00000466192 RNF222A6NCQ9 220 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 CRYM-AS1A6NIL9 109 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 CDIPTO14735 213 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 HS3ST1O14792 307 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 NAPSAO96009 420 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 BMP5P22003 454 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 TUBG1P23258 451 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 RBMXP38159 391 aaKnown RBP15.51■□□□□ 0.07
COL9A3-205ENST00000466192 CYCSP99999 105 aaKnown RBP15.51■□□□□ 0.07
COL9A3-205ENST00000466192 GFRALQ6UXV0 394 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 VRK1Q99986 396 aaPredicted RBP15.51■□□□□ 0.07
COL9A3-205ENST00000466192 TUBG2Q9NRH3 451 aa15.51■□□□□ 0.07
COL9A3-205ENST00000466192 A8MXE2 369 aa15.5■□□□□ 0.07
COL9A3-205ENST00000466192 RRASP10301 218 aa15.5■□□□□ 0.07
COL9A3-205ENST00000466192 KITLGP21583 273 aa15.5■□□□□ 0.07
COL9A3-205ENST00000466192 GLP1RP43220 463 aa15.5■□□□□ 0.07
COL9A3-205ENST00000466192 IL13RA2Q14627 380 aa15.5■□□□□ 0.07
COL9A3-205ENST00000466192 ABCA11PQ4W5N1 156 aa15.5■□□□□ 0.07
COL9A3-205ENST00000466192 ACOT7LQ6ZUV0 252 aa15.5■□□□□ 0.07
COL9A3-205ENST00000466192 FAM219AQ8IW50 185 aa15.5■□□□□ 0.07
COL9A3-205ENST00000466192 KCNRGQ8N5I3 272 aa15.5■□□□□ 0.07
COL9A3-205ENST00000466192 SUMF2Q8NBJ7 301 aa15.5■□□□□ 0.07
COL9A3-205ENST00000466192 OR5T2Q8NGG2 359 aa15.5■□□□□ 0.07
COL9A3-205ENST00000466192 ASF1BQ9NVP2 202 aa15.5■□□□□ 0.07
COL9A3-205ENST00000466192 COQ3Q9NZJ6 369 aa15.5■□□□□ 0.07
COL9A3-205ENST00000466192 TRAV24A0A0B4J272 114 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 A0A0G2JNJ9 132 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 OR2F2O95006 317 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 GRPP07492 148 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 ERVK11-1P61568 191 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 OR2F1Q13607 317 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 ZNF345Q14585 488 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 ZNF718Q3SXZ3 478 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 PHLDA2Q53GA4 152 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 Q6ZR03 302 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 RDH5Q92781 318 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 C1orf123Q9NWV4 160 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 Q9UFV3 132 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 POLDIP2Q9Y2S7 368 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 ZZEF1O43149 2961 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 M0R1B8 84 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 TIMM8AO60220 97 aaPredicted RBP15.49■□□□□ 0.07
COL9A3-205ENST00000466192 B3GALNT1O75752 331 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 ATF4P18848 351 aaPredicted RBP15.49■□□□□ 0.07
COL9A3-205ENST00000466192 FAM27E3Q08E93 113 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 MBNL2Q5VZF2 373 aaKnown RBP15.49■□□□□ 0.07
COL9A3-205ENST00000466192 INO80EQ8NBZ0 244 aaPredicted RBP15.49■□□□□ 0.07
COL9A3-205ENST00000466192 MOB3AQ96BX8 217 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 RHOFQ9HBH0 211 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 Q9N2K0 584 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 GSKIPQ9P0R6 139 aa15.49■□□□□ 0.07
COL9A3-205ENST00000466192 KANTRA0A1W2PQU2 76 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 TMEM210A6NLX4 147 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 SCTP09683 121 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 PGA5P0DJD9 388 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 AADACP22760 399 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 C22orf34Q6ZV56 151 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 RTN4IP1Q8WWV3 396 aaPredicted RBP15.48■□□□□ 0.07
COL9A3-205ENST00000466192 DCUN1D4Q92564 292 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 NRIP2Q9BQI9 281 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 RNF126Q9BV68 326 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 SPACA1Q9HBV2 294 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 ZNF835Q9Y2P0 537 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 POM121CA8CG34 1229 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 GCH1P30793 250 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 HERV-K104P61576 105 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 MSMPQ1L6U9 139 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 SP6Q3SY56 376 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 Q6P435 159 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 Q6ZS49 121 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 SCARB1Q8WTV0 552 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 MUCL1Q96DR8 90 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 C2orf50Q96LR7 162 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 IFT22Q9H7X7 185 aa15.48■□□□□ 0.07
COL9A3-205ENST00000466192 MSL2Q9HCI7 577 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms