RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 HLA-HP01893 362 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 OPN1SWP03999 348 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 GUSBP08236 651 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 TCN1P20061 433 aaPredicted RBP3.29□□□□□ -1.88
UBR4-209ENST00000465036 PSMB6P28072 239 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 ELK4P28324 431 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 AQP1P29972 269 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 GPR183P32249 361 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 OPRM1P35372 400 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 POU3F4P49335 361 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 GZMMP51124 257 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 ATP4BP51164 291 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 MTPNP58546 118 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 HPCAP84074 193 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 ZNF85Q03923 595 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 DGCR6Q14129 220 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 TSC22D1Q15714 1073 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 DUSP7Q16829 419 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 TRIM16LQ309B1 348 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 FBXL19-AS1Q494R0 122 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 TIGITQ495A1 244 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 MRPL2Q5T653 305 aaKnown RBP3.29□□□□□ -1.88
UBR4-209ENST00000465036 SLC25A47Q6Q0C1 308 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 ADAMTSL5Q6ZMM2 481 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 STAC2Q6ZMT1 411 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 CHMP1BQ7LBR1 199 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 FAM122BQ7Z309 247 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 ZNF550Q7Z398 422 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 NUFIP2Q7Z417 695 aaKnown RBP3.29□□□□□ -1.88
UBR4-209ENST00000465036 ABHD12BQ7Z5M8 362 aaPredicted RBP3.29□□□□□ -1.88
UBR4-209ENST00000465036 APRG1Q8IVJ8 170 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 BPIFB2Q8N4F0 458 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 TPRX1Q8N7U7 411 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 OR52P1PQ8NH57 321 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 C10orf82Q8WW14 230 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 STMN2Q93045 179 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 MYDGFQ969H8 173 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 ISOC2Q96AB3 205 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 WFIKKN1Q96NZ8 548 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 RNF2Q99496 336 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 SFXN3Q9BWM7 321 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 TMEM165Q9HC07 324 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 ESM1Q9NQ30 184 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 ACER3Q9NUN7 267 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 CLEC5AQ9NY25 188 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 EMC3Q9P0I2 261 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 ARMCX1Q9P291 453 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 ZNF443Q9Y2A4 671 aaPredicted RBP3.29□□□□□ -1.88
UBR4-209ENST00000465036 SLC35A3Q9Y2D2 325 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 PRR14LQ5THK1 2151 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 MPDZO75970 2070 aa3.29□□□□□ -1.88
UBR4-209ENST00000465036 ABCA4P78363 2273 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 IGKV1D-42A0A075B6H8 117 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 TMED7-TICAM2A0A0A6YYA0 188 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 CENPXA8MT69 81 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 ZNF724A8MTY0 619 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 DEFB108AA8MXU0 73 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 SRRM5B3KS81 715 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 C11orf98E9PRG8 122 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 ITGB1BP1O14713 200 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 SURF4O15260 269 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 SS18L1O75177 396 aaPredicted RBP3.28□□□□□ -1.88
UBR4-209ENST00000465036 CST4P01036 141 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 IGHV3-9P01782 118 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 CRHP06850 196 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 DBIP07108 87 aaKnown RBP3.28□□□□□ -1.88
UBR4-209ENST00000465036 GPX2P18283 190 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 ME2P23368 584 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 LOXP28300 417 aaPredicted RBP3.28□□□□□ -1.88
UBR4-209ENST00000465036 AGTR1P30556 359 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 CD79BP40259 229 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 EIF1P41567 113 aaKnown RBP3.28□□□□□ -1.88
UBR4-209ENST00000465036 CRYBA2P53672 197 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 CRISP3P54108 245 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 OR2B6P58173 313 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 UBE2G2P60604 165 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 UBE2MP61081 183 aaKnown RBP3.28□□□□□ -1.88
UBR4-209ENST00000465036 RPS27AP62979 156 aaKnown RBP3.28□□□□□ -1.88
UBR4-209ENST00000465036 CDK6Q00534 326 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 SCRN3Q0VDG4 424 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 FADDQ13158 208 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 LIN52Q52LA3 116 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 SAMD4BQ5PRF9 694 aaKnown RBP3.28□□□□□ -1.88
UBR4-209ENST00000465036 RNLSQ5VYX0 342 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 REP15Q6BDI9 236 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 C3orf33Q6P1S2 294 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 TFAP2EQ6VUC0 442 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 TMPPEQ6ZT21 453 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 SLC25A48Q6ZT89 311 aaKnown RBP3.28□□□□□ -1.88
UBR4-209ENST00000465036 PRSS48Q7RTY5 328 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 GRINAQ7Z429 371 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 MTURNQ8N3F0 131 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 CADM2Q8N3J6 435 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 CYB561A3Q8NBI2 242 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 OR9Q2Q8NGE9 314 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 OR4D11Q8NGI4 311 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 ZNF563Q8TA94 476 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 TOMM40LQ969M1 308 aa3.28□□□□□ -1.88
UBR4-209ENST00000465036 CPNE4Q96A23 557 aaPredicted RBP3.28□□□□□ -1.88
UBR4-209ENST00000465036 RNF170Q96K19 258 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms