RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 RNF126Q9BV68 326 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 SFXN3Q9BWM7 321 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 BCL2L14Q9BZR8 327 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 METTL8Q9H825 291 aaKnown RBP10.85□□□□□ -0.67
VAPB-203ENST00000463370 SLC2A9Q9NRM0 540 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 SHPKQ9UHJ6 478 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 PTPRQQ9UMZ3 2332 aa10.85□□□□□ -0.67
VAPB-203ENST00000463370 A0A0G2JNJ9 132 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 SLC33A1O00400 549 aaPredicted RBP10.84□□□□□ -0.67
VAPB-203ENST00000463370 NXPH2O95156 264 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 OR5AC1P0C628 307 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 GLP1RP43220 463 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 RBM39Q14498 530 aaKnown RBP10.84□□□□□ -0.67
VAPB-203ENST00000463370 TMEM65Q6PI78 240 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 RTN4IP1Q8WWV3 396 aaPredicted RBP10.84□□□□□ -0.67
VAPB-203ENST00000463370 SNRNP40Q96DI7 357 aaKnown RBP10.84□□□□□ -0.67
VAPB-203ENST00000463370 NMES1Q9C002 83 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 SPACA1Q9HBV2 294 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 UFSP2Q9NUQ7 469 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 Q9UFV3 132 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 POLDIP2Q9Y2S7 368 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 IGKV1D-13A0A0B4J2D9 117 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 A8MXE2 369 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 TRDCB7Z8K6 153 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 IFNA7P01567 189 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 IGKV1-13P0DP09 117 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 PSMB6P28072 239 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 CCKARP32238 428 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 ZNF718Q3SXZ3 478 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 MBNL2Q5VZF2 373 aaKnown RBP10.84□□□□□ -0.67
VAPB-203ENST00000463370 LDLRAD3Q86YD5 345 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 FAM169BQ8N8A8 192 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 DHRS9Q9BPW9 319 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 SLX1AQ9BQ83 275 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 NAA60Q9H7X0 242 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 IFT22Q9H7X7 185 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 ASF1BQ9NVP2 202 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 UBQLN2Q9UHD9 624 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 RAXQ9Y2V3 346 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 ATP23Q9Y6H3 246 aa10.84□□□□□ -0.67
VAPB-203ENST00000463370 ANKRD34BA5PLL1 514 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 TPD52L2O43399 206 aaKnown RBP10.83□□□□□ -0.68
VAPB-203ENST00000463370 RP2O75695 350 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 SLC34A2O95436 690 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 GCH1P30793 250 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 GNRHRP30968 328 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 ABCA11PQ4W5N1 156 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 PAN3Q58A45 887 aaKnown RBP10.83□□□□□ -0.68
VAPB-203ENST00000463370 ALKAL2Q6UX46 152 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 POC1AQ8NBT0 407 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 UBALD1Q8TB05 177 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 MRPL24Q96A35 216 aaKnown RBP10.83□□□□□ -0.68
VAPB-203ENST00000463370 RRNAD1Q96FB5 475 aaKnown RBP10.83□□□□□ -0.68
VAPB-203ENST00000463370 RASL12Q9NYN1 266 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 OR5AC2Q9NZP5 309 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 OR14J1Q9UGF5 321 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 DUSP13Q9UII6 198 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 MAB21L2Q9Y586 359 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 TMEM210A6NLX4 147 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 S100A1P23297 94 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 HERV-K104P61576 105 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 IL15RAQ13261 267 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 TMEM187Q14656 261 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 ZNF146Q15072 292 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 SRSF7Q16629 238 aaKnown RBP eCLIP10.83□□□□□ -0.68
VAPB-203ENST00000463370 EIF2S3LQ2VIR3 472 aaKnown RBP10.83□□□□□ -0.68
VAPB-203ENST00000463370 SPRNQ5BIV9 151 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 VHLLQ6RSH7 139 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 PCSK4Q6UW60 755 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 CITED4Q96RK1 184 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 VRK1Q99986 396 aaPredicted RBP10.83□□□□□ -0.68
VAPB-203ENST00000463370 RSRP1Q9BUV0 290 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 HES4Q9HCC6 221 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 GSKIPQ9P0R6 139 aa10.83□□□□□ -0.68
VAPB-203ENST00000463370 A6NLC8 198 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 PRRG2O14669 202 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 PSPNO60542 156 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 SPDEFO95238 335 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 C4BPBP20851 252 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 KCNJ3P48549 501 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 RAB32Q13637 225 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 ZNF880Q6PDB4 577 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 WDR82Q6UXN9 313 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 GFRALQ6UXV0 394 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 Q8IYB0 196 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 SLC38A6Q8IZM9 456 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 KCNRGQ8N5I3 272 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 THAP6Q8TBB0 222 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 PIK3IP1Q96FE7 263 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 CXXC4Q9H2H0 198 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 C1orf123Q9NWV4 160 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 TUSC2O75896 110 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 TK1P04183 234 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 UCP3P55916 312 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 RGS7BPQ6MZT1 257 aaPredicted RBP10.82□□□□□ -0.68
VAPB-203ENST00000463370 UNQ6126/PRO20091Q6UXV3 157 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 ZNF818PQ6ZRF7 136 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 LHFPL5Q8TAF8 219 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 GLYATL2Q8WU03 294 aa10.82□□□□□ -0.68
VAPB-203ENST00000463370 SECTM1Q8WVN6 248 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms