RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 DUSP1P28562 367 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 RAB7AP51149 207 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 PSME3P61289 254 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 AESQ08117 197 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 HES1Q14469 280 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 RBM39Q14498 530 aaKnown RBP5.93□□□□□ -1.46
SMC3-202ENST00000462899 HNF4GQ14541 408 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 KPNB1Q14974 876 aaKnown RBP5.93□□□□□ -1.46
SMC3-202ENST00000462899 HAGHQ16775 308 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 ZNF829Q3KNS6 432 aaPredicted RBP5.93□□□□□ -1.46
SMC3-202ENST00000462899 SLC35D3Q5M8T2 416 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 SLC25A26Q70HW3 274 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 COMMD2Q86X83 199 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 CATSPERDQ86XM0 798 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 Q8IYB0 196 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 FAM58AQ8N1B3 248 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 BBS1Q8NFJ9 593 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 OR6Q1Q8NGQ2 317 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 OR1N2Q8NGR9 330 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 TRMT10AQ8TBZ6 339 aaKnown RBP5.93□□□□□ -1.46
SMC3-202ENST00000462899 DLX4Q92988 240 aaPredicted RBP5.93□□□□□ -1.46
SMC3-202ENST00000462899 RBMXL1Q96E39 390 aaKnown RBP5.93□□□□□ -1.46
SMC3-202ENST00000462899 KCTD7Q96MP8 289 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 MNTQ99583 582 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 NIPSNAP1Q9BPW8 284 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 THAP7Q9BT49 309 aaPredicted RBP5.93□□□□□ -1.46
SMC3-202ENST00000462899 YIPF3Q9GZM5 350 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 CHST5Q9GZS9 411 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 COMMD4Q9H0A8 199 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 KLK15Q9H2R5 256 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 AP5S1Q9NUS5 200 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 KIAA1456Q9P272 454 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 LAMP5Q9UJQ1 280 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMC3-202ENST00000462899 PSG11Q9UQ72 335 aa5.93□□□□□ -1.46
SMC3-202ENST00000462899 AMMECR1Q9Y4X0 333 aaPredicted RBP5.93□□□□□ -1.46
SMC3-202ENST00000462899 HSPG2P98160 4391 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 IGHV1-3A0A0C4DH29 117 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 IGKV1-12A0A0C4DH73 117 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 KBTBD11-OT1A0A1B0GTJ5 212 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 FAM230AA0A1W2PPH8 454 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 FAM90A10PA6NDY2 464 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 CCDC182A6NF36 153 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 NPIPB11E5RHQ5 1161 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 SIRPB1O00241 398 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 TNFRSF11BO00300 401 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 ARPC2O15144 300 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 RRP9O43818 475 aaKnown RBP5.92□□□□□ -1.46
SMC3-202ENST00000462899 CCNB2O95067 398 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 IGKV1D-12P01611 117 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 HSD17B1P14061 328 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 H2AFXP16104 143 aaPredicted RBP5.92□□□□□ -1.46
SMC3-202ENST00000462899 POU3F4P49335 361 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 PPP1R8Q12972 351 aaKnown RBP5.92□□□□□ -1.46
SMC3-202ENST00000462899 MADCAM1Q13477 382 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 SRSF7Q16629 238 aaKnown RBP eCLIP5.92□□□□□ -1.46
SMC3-202ENST00000462899 MLANAQ16655 118 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 Q6P435 159 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 OR4D6Q8NGJ1 314 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 ST6GALNAC6Q969X2 333 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 MCUR1Q96AQ8 359 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 OSBPL10Q9BXB5 764 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 MROQ9BYG7 248 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 PPIL3Q9H2H8 161 aaKnown RBP5.92□□□□□ -1.46
SMC3-202ENST00000462899 EFCAB1Q9HAE3 211 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 HMG20AQ9NP66 347 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 SPAG4Q9NPE6 437 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 FGFR1OP2Q9NVK5 253 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 MAGEL2Q9UJ55 1249 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 VSIG4Q9Y279 399 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 R4GMQ9 66 aa5.92□□□□□ -1.46
SMC3-202ENST00000462899 IGKV1-9A0A0C4DH69 117 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 FUOMA2VDF0 154 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 SLC33A1O00400 549 aaPredicted RBP5.91□□□□□ -1.46
SMC3-202ENST00000462899 HSD17B6O14756 317 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 HSPA12AO43301 675 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 MPZL2O60487 215 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 INMTO95050 263 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 IL1AP01583 271 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 IGLV1-51P01701 117 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 VDAC1P21796 283 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 CNTFRP26992 372 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 FUT6P51993 359 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 RIDAP52758 137 aaKnown RBP5.91□□□□□ -1.46
SMC3-202ENST00000462899 SLURP1P55000 103 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 ISL1P61371 349 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 PAX5Q02548 391 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 KIR3DS1Q14943 382 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 MICAQ29983 383 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 C19orf54Q5BKX5 351 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 LINC00322Q6ZN03 302 aaPredicted RBP5.91□□□□□ -1.46
SMC3-202ENST00000462899 CPOQ8IVL8 374 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 OR51T1Q8NGJ9 327 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 OR13A1Q8NGR1 328 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 IL17DQ8TAD2 202 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 TEX47Q8TBZ9 253 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 ARPC1AQ92747 370 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 LEAP2Q969E1 77 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 S1PR3Q99500 378 aa5.91□□□□□ -1.46
SMC3-202ENST00000462899 NABP2Q9BQ15 211 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 235.7 ms