RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 RHOFQ9HBH0 211 aa12.77□□□□□ -0.37
COL7A1-204ENST00000462475 OR6C3Q9NZP0 311 aa12.77□□□□□ -0.37
COL7A1-204ENST00000462475 AASSQ9UDR5 926 aa12.77□□□□□ -0.37
COL7A1-204ENST00000462475 A0A1W2PPI3 338 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 PSMB11A5LHX3 300 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 FAM90A18PA6NE21 464 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 FAM90A16PA6NEW6 464 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 FAM90A20PA6NIJ5 464 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 FAM90A9PA6NNJ1 464 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 FAM90A12PA8MX19 464 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 FAM90A5PA8MXJ8 464 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 H0YJX3 145 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 DUS4LO95620 317 aaKnown RBP12.76□□□□□ -0.37
COL7A1-204ENST00000462475 HCKP08631 526 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 FAM90A15PP0C7V4 464 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 FAM90A13PP0C7W8 464 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 FAM90A14PP0C7W9 464 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 FAM90A24PP0C7X0 464 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 CGB3P0DN86 165 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 CGB7P0DN87 165 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 TMEM225BP0DP42 221 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 EGFEM1PQ0D2K5 195 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 KISS1Q15726 138 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 LPCAT4Q643R3 524 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 MRPL41Q8IXM3 137 aaKnown RBP12.76□□□□□ -0.37
COL7A1-204ENST00000462475 ACBD7Q8N6N7 88 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 OR51T1Q8NGJ9 327 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 LGALS12Q96DT0 336 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 HRASLS5Q96KN8 279 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 ZNF649Q9BS31 505 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 CALYQ9NYX4 217 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 KIF25Q9UIL4 384 aa12.76□□□□□ -0.37
COL7A1-204ENST00000462475 MEIKINA0A087WXM9 373 aa12.75□□□□□ -0.37
COL7A1-204ENST00000462475 TRAV24A0A0B4J272 114 aa12.75□□□□□ -0.37
COL7A1-204ENST00000462475 J3QR06 171 aa12.75□□□□□ -0.37
COL7A1-204ENST00000462475 IL1AP01583 271 aa12.75□□□□□ -0.37
COL7A1-204ENST00000462475 ALPLP05186 524 aa12.75□□□□□ -0.37
COL7A1-204ENST00000462475 FAM106CPP0CH98 169 aa12.75□□□□□ -0.37
COL7A1-204ENST00000462475 SNRPGP62308 76 aaKnown RBP12.75□□□□□ -0.37
COL7A1-204ENST00000462475 DIAPH2-AS1Q14236 149 aa12.75□□□□□ -0.37
COL7A1-204ENST00000462475 PAN3Q58A45 887 aaKnown RBP12.75□□□□□ -0.37
COL7A1-204ENST00000462475 DEFB121Q5J5C9 76 aa12.75□□□□□ -0.37
COL7A1-204ENST00000462475 SLC25A30Q5SVS4 291 aa12.75□□□□□ -0.37
COL7A1-204ENST00000462475 C18orf65Q6ZTR6 163 aa12.75□□□□□ -0.37
COL7A1-204ENST00000462475 DRAM1Q8N682 238 aa12.75□□□□□ -0.37
COL7A1-204ENST00000462475 NOL4LQ96MY1 436 aaPredicted RBP12.75□□□□□ -0.37
COL7A1-204ENST00000462475 NR1H4Q96RI1 486 aaPredicted RBP12.75□□□□□ -0.37
COL7A1-204ENST00000462475 ISG20L2Q9H9L3 353 aaKnown RBP12.75□□□□□ -0.37
COL7A1-204ENST00000462475 EXOGQ9Y2C4 368 aaKnown RBP12.75□□□□□ -0.37
COL7A1-204ENST00000462475 AMMECR1Q9Y4X0 333 aaPredicted RBP12.75□□□□□ -0.37
COL7A1-204ENST00000462475 E9PQ18 207 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 EI24O14681 340 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 SULT1B1O43704 296 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 ZFPL1O95159 310 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 DBTP11182 482 aaKnown RBP12.74□□□□□ -0.37
COL7A1-204ENST00000462475 MTNR1BP49286 362 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 GNG10P50151 68 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 RPL23AP62750 156 aaKnown RBP12.74□□□□□ -0.37
COL7A1-204ENST00000462475 HES1Q14469 280 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 LTC4SQ16873 150 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 ZIK1Q3SY52 487 aaPredicted RBP12.74□□□□□ -0.37
COL7A1-204ENST00000462475 ZNF691Q5VV52 312 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 MEDAGQ5VYS4 303 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 LHFPL3Q86UP9 236 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 THNSL2Q86YJ6 484 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 C5orf56Q8N8D9 126 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 PLPPR1Q8TBJ4 325 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 PYDC1Q8WXC3 89 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 ALG8Q9BVK2 526 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 PCDHB16Q9NRJ7 776 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 IDI2-AS1Q9NZ38 188 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 PSG11Q9UQ72 335 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 TENM3Q9P273 2699 aa12.74□□□□□ -0.37
COL7A1-204ENST00000462475 E9PI62 339 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 TMEM11P17152 192 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 SSTR5P35346 364 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 THBS3P49746 956 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 RASSF2P50749 326 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 GALEQ14376 348 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 HNF4GQ14541 408 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 RSBN1Q5VWQ0 802 aaPredicted RBP12.73□□□□□ -0.37
COL7A1-204ENST00000462475 ELP2Q6IA86 826 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 C8orf86Q6ZUL3 223 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 OR2W3Q7Z3T1 314 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 SERPINA12Q8IW75 414 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 PARP16Q8N5Y8 322 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 ZNF565Q8N9K5 539 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 OR51D1Q8NGF3 324 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 OR51A2Q8NGJ7 313 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 OR10K1Q8NGX5 313 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 RFESDQ8TAC1 157 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 CNIH3Q8TBE1 160 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 MRGPRDQ8TDS7 321 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 PDCD1LG2Q9BQ51 273 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 LINC00574Q9H8X3 128 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 LINC00527Q9UJ94 153 aa12.73□□□□□ -0.37
COL7A1-204ENST00000462475 TRAV39A0A0B4J263 110 aa12.72□□□□□ -0.37
COL7A1-204ENST00000462475 TMEM212A6NML5 194 aa12.72□□□□□ -0.37
COL7A1-204ENST00000462475 NPIPB11E5RHQ5 1161 aa12.72□□□□□ -0.37
COL7A1-204ENST00000462475 GABRPO00591 440 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms