RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 OPN1MW3P0DN78 364 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 CGB3P0DN86 165 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 CGB7P0DN87 165 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 CD28P10747 220 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 BRS3P32247 399 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 IL13RA2Q14627 380 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 RSU1Q15404 277 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 LRRC36Q1X8D7 754 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 PAN3Q58A45 887 aaKnown RBP15.19■□□□□ 0.02
VARS-220ENST00000461874 TTC23Q5W5X9 447 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 ZNF565Q8N9K5 539 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 OR10K1Q8NGX5 313 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 CYGBQ8WWM9 190 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 TMEM106AQ96A25 262 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 CREB3L1Q96BA8 519 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 FAM192AQ9GZU8 254 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 ZNF281Q9Y2X9 895 aa15.19■□□□□ 0.02
VARS-220ENST00000461874 EXOSC1Q9Y3B2 195 aaKnown RBP15.19■□□□□ 0.02
VARS-220ENST00000461874 NOTCH3Q9UM47 2321 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 BUB1B-PAK6H3BSN5 160 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 TOR1AO14656 332 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 MYL12AP19105 171 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 PRRX1P54821 245 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 HLA-DRB5Q30154 266 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 PIGYQ3MUY2 71 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 UTF1Q5T230 341 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 C16orf82Q7Z2V1 217 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 C1QL4Q86Z23 238 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 SMIM19Q96E16 107 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 BARHL1Q9BZE3 327 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 TMEM138Q9NPI0 162 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 C8orf4Q9NR00 106 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 CLEC2DQ9UHP7 191 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 KIF25Q9UIL4 384 aa15.18■□□□□ 0.02
VARS-220ENST00000461874 MEIKINA0A087WXM9 373 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 LY6LH3BQJ8 138 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 PEX14O75381 377 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 HTR3BO95264 441 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 LALBAP00709 142 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 CD24P25063 80 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 NFYBP25208 207 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 CEACAM3P40198 252 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 GLP1RP43220 463 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 OR3A4PP47883 348 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 ARHGDIBP52566 201 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 PPP3R1P63098 170 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 ADARB1P78563 741 aaKnown RBP15.17■□□□□ 0.02
VARS-220ENST00000461874 PAX5Q02548 391 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 TPTE2P1Q5T6R2 138 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 LYG1Q8N1E2 194 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 PACRGLQ8N7B6 248 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 SETD9Q8NE22 299 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 OR13A1Q8NGR1 328 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 TMEM80Q96HE8 168 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 KIRREL1Q96J84 757 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 OR5M11Q96RB7 305 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 OCSTAMPQ9BR26 566 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 LINC00574Q9H8X3 128 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 LIN7BQ9HAP6 207 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 IL36GQ9NZH8 169 aa15.17■□□□□ 0.02
VARS-220ENST00000461874 CDRT1O95170 752 aa15.16■□□□□ 0.02
VARS-220ENST00000461874 C21orf33P30042 268 aaPredicted RBP15.16■□□□□ 0.02
VARS-220ENST00000461874 ZNF93P35789 620 aaPredicted RBP15.16■□□□□ 0.02
VARS-220ENST00000461874 VDAC2P45880 294 aaPredicted RBP15.16■□□□□ 0.02
VARS-220ENST00000461874 KCNJ3P48549 501 aa15.16■□□□□ 0.02
VARS-220ENST00000461874 EMX1Q04741 257 aaPredicted RBP15.16■□□□□ 0.02
VARS-220ENST00000461874 NSUN5P1Q3KNT7 163 aa15.16■□□□□ 0.02
VARS-220ENST00000461874 TMEM95Q3KNT9 176 aa15.16■□□□□ 0.02
VARS-220ENST00000461874 ARSJQ5FYB0 599 aaPredicted RBP15.16■□□□□ 0.02
VARS-220ENST00000461874 DDI2Q5TDH0 399 aa15.16■□□□□ 0.02
VARS-220ENST00000461874 RSBN1Q5VWQ0 802 aaPredicted RBP15.16■□□□□ 0.02
VARS-220ENST00000461874 DMKNQ6E0U4 476 aaPredicted RBP15.16■□□□□ 0.02
VARS-220ENST00000461874 DHRSXQ8N5I4 330 aa15.16■□□□□ 0.02
VARS-220ENST00000461874 OR52N1Q8NH53 320 aa15.16■□□□□ 0.02
VARS-220ENST00000461874 OR9G1Q8NH87 305 aa15.16■□□□□ 0.02
VARS-220ENST00000461874 GHSRQ92847 366 aa15.16■□□□□ 0.02
VARS-220ENST00000461874 AKR1E2Q96JD6 320 aa15.16■□□□□ 0.02
VARS-220ENST00000461874 METTL9Q9H1A3 318 aa15.16■□□□□ 0.02
VARS-220ENST00000461874 CHCHD3Q9NX63 227 aaKnown RBP15.16■□□□□ 0.02
VARS-220ENST00000461874 CALYQ9NYX4 217 aa15.16■□□□□ 0.02
VARS-220ENST00000461874 ING4Q9UNL4 249 aa15.16■□□□□ 0.02
VARS-220ENST00000461874 TRBV5-5A0A0J9YX44 114 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 OOSP1A8MZH6 123 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 IL1AP01583 271 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 BDKRB2P30411 391 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 MED21Q13503 144 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 FBLN7Q53RD9 439 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 NHLRC3Q5JS37 347 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 NDUFA11Q86Y39 141 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 ZNF485Q8NCK3 441 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 OR13C5Q8NGS8 318 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 PLPPR1Q8TBJ4 325 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 GGHQ92820 318 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 ORAI1Q96D31 301 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 CITED2Q99967 270 aaPredicted RBP15.15■□□□□ 0.02
VARS-220ENST00000461874 DPCDQ9BVM2 203 aaPredicted RBP15.15■□□□□ 0.02
VARS-220ENST00000461874 MMP28Q9H239 520 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 IFT22Q9H7X7 185 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 ZNF581Q9P0T4 197 aa15.15■□□□□ 0.02
VARS-220ENST00000461874 ST3GAL6Q9Y274 331 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms