RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 C4orf48Q5BLP8 95 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 KRBOX4Q5JUW0 171 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 KPRPQ5T749 579 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-207ENST00000461798 PRAMEF5Q5TYX0 476 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 BAIAP2L2Q6UXY1 529 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 Q6ZS46 218 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 TMEM219Q86XT9 240 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 ZNF565Q8N9K5 539 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 ZNF555Q8NEP9 628 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 GPR148Q8TDV2 347 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 RGP1Q92546 391 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-207ENST00000461798 LIN7BQ9HAP6 207 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 BABAM2Q9NXR7 383 aa7.34□□□□□ -1.23
BRCA1-207ENST00000461798 SMPD3Q9NY59 655 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-207ENST00000461798 TRAV24A0A0B4J272 114 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 ADARB2-AS1A8MUL3 147 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 NPIPB11E5RHQ5 1161 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 H0YJX3 145 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 BUB1B-PAK6H3BSN5 160 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 GABRPO00591 440 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 TOR1AO14656 332 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 MAGEB3O15480 346 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 FBXO24O75426 580 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 GPX5O75715 221 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 CD2P06729 351 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 CD28P10747 220 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 CEACAM3P40198 252 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 PTGFRP43088 359 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 KCNJ3P48549 501 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 ETV1P50549 477 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 PRRX1P54821 245 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 CD83Q01151 205 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 SCN1BQ07699 218 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 SMN1Q16637 294 aaKnown RBP7.33□□□□□ -1.24
BRCA1-207ENST00000461798 ZSCAN26Q16670 478 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 HLA-DRB5Q30154 266 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 NHLRC3Q5JS37 347 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 SAMD5Q5TGI4 173 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 TMPRSS11AQ6ZMR5 421 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 SLC16A12Q6ZSM3 486 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 NDUFA11Q86Y39 141 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 THNSL2Q86YJ6 484 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 C11orf44Q8N8P7 122 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 OR10A7Q8NGE5 316 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 OR4D6Q8NGJ1 314 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 OR51A2Q8NGJ7 313 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 CNIH3Q8TBE1 160 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 TSEN15Q8WW01 171 aaKnown RBP7.33□□□□□ -1.24
BRCA1-207ENST00000461798 BARHL1Q9BZE3 327 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 IFT22Q9H7X7 185 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 ZNF286AQ9HBT8 521 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 C8orf4Q9NR00 106 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 IL36GQ9NZH8 169 aa7.33□□□□□ -1.24
BRCA1-207ENST00000461798 DIMT1Q9UNQ2 313 aaKnown RBP7.33□□□□□ -1.24
BRCA1-207ENST00000461798 TGP01266 2768 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 FAM90A18PA6NE21 464 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 FAM90A16PA6NEW6 464 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 FAM90A20PA6NIJ5 464 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 FAM90A9PA6NNJ1 464 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 FAM90A12PA8MX19 464 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 FAM90A5PA8MXJ8 464 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 OR2F2O95006 317 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 BAG2O95816 211 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 FAM90A15PP0C7V4 464 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 FAM90A13PP0C7W8 464 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 FAM90A14PP0C7W9 464 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 FAM90A24PP0C7X0 464 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 C21orf33P30042 268 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-207ENST00000461798 SOX2P48431 317 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 ARHGDIBP52566 201 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 ADARB1P78563 741 aaKnown RBP7.32□□□□□ -1.24
BRCA1-207ENST00000461798 ATXN7L3Q14CW9 347 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-207ENST00000461798 BEAN1Q3B7T3 259 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 PAN3Q58A45 887 aaKnown RBP7.32□□□□□ -1.24
BRCA1-207ENST00000461798 TPTE2P1Q5T6R2 138 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 RSBN1Q5VWQ0 802 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-207ENST00000461798 TTC23Q5W5X9 447 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 HIST2H2BDQ6DRA6 164 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 XAF1Q6GPH4 301 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 CCDC144NLQ6NUI1 221 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 PACRGLQ8N7B6 248 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 ZNF485Q8NCK3 441 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 WFDC9Q8NEX5 89 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 OR9G1Q8NH87 305 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 TNFAIP8L1Q8WVP5 186 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 STMN2Q93045 179 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 TMEM106AQ96A25 262 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 KIRREL1Q96J84 757 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 AKR1E2Q96JD6 320 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 RBM14Q96PK6 669 aaKnown RBP7.32□□□□□ -1.24
BRCA1-207ENST00000461798 PPIL3Q9H2H8 161 aaKnown RBP7.32□□□□□ -1.24
BRCA1-207ENST00000461798 TMEM138Q9NPI0 162 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 TAS2R4Q9NYW5 299 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-207ENST00000461798 KIF25Q9UIL4 384 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 ZNF281Q9Y2X9 895 aa7.32□□□□□ -1.24
BRCA1-207ENST00000461798 EXOSC1Q9Y3B2 195 aaKnown RBP7.32□□□□□ -1.24
BRCA1-207ENST00000461798 SIRT4Q9Y6E7 314 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-207ENST00000461798 TET2Q6N021 2002 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-207ENST00000461798 NOTCH3Q9UM47 2321 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms