RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 IGHV4-39P01824 125 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 HPXP02790 462 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 DTYMKP23919 212 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 PRDX2P32119 198 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 CDKN1AP38936 164 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 GABRA2P47869 451 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 KLF9Q13886 244 aaPredicted RBP12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 PEG10Q86TG7 708 aaKnown RBP12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 TMEM229BQ8NBD8 167 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 ENKURQ8TC29 256 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 ST6GALNAC5Q9BVH7 336 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 ETAA1Q9NY74 926 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 TBC1D24Q9ULP9 559 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 USF3Q68DE3 2245 aa12.72□□□□□ -0.37
TMEM39A-203ENST00000461654 VPS13CQ709C8 3753 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 ZFHX3Q15911 3703 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 PPIAL4EA0A075B759 164 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 IGHV3OR15-7A0A075B7D8 119 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 TRAV24A0A0B4J272 114 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 OOEPA6NGQ2 149 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 PPIAL4DF5H284 164 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 C3orf80F5H4A9 247 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 TMEM178BH3BS89 294 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 LGALS8O00214 317 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 SLC33A1O00400 549 aaPredicted RBP12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 SMAD7O15105 426 aaKnown RBP12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 AKAIN1P0CW23 69 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 PPIAL4FP0DN26 164 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 PSG2P11465 335 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 TBPP20226 339 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 LMO1P25800 156 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 KCNJ3P48549 501 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 KCNJ8Q15842 424 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 ACTBL2Q562R1 376 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 SFRP4Q6FHJ7 346 aaPredicted RBP12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 DCDC5Q6ZRR9 648 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 Q71RC1 249 aaPredicted RBP12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 RTN4RL2Q86UN3 420 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 ASCC1Q8N9N2 400 aaKnown RBP12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 OR5T2Q8NGG2 359 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 ZNF581Q9P0T4 197 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 PPIAL4AQ9Y536 164 aa12.71□□□□□ -0.37
TMEM39A-203ENST00000461654 NKX6-3A6NJ46 265 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 POM121CA8CG34 1229 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 PLA2G10O15496 165 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 FCER2P06734 321 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 AMY2BP19961 511 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 CEBPDP49716 269 aaPredicted RBP12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 TAS2R46P59540 309 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 MRPS11P82912 194 aaKnown RBP12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 COL10A1Q03692 680 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 MEF2DQ14814 521 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 RNASE10Q5GAN6 216 aaKnown RBP12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 TEX36Q5VZQ5 186 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 STEAP1BQ6NZ63 245 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 HOGA1Q86XE5 327 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 BPIFB2Q8N4F0 458 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 DEFB108BQ8NET1 73 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 BEST4Q8NFU0 473 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 REG4Q9BYZ8 158 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 C11orf54Q9H0W9 315 aaPredicted RBP12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 MYOZ1Q9NP98 299 aaPredicted RBP12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 MCUBQ9NWR8 336 aa12.7□□□□□ -0.38
TMEM39A-203ENST00000461654 IGKV1D-17A0A075B6S4 117 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 FAM240BA0A1B0GVZ2 78 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 NDUFS7O75251 213 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 RAB3DO95716 219 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 IFNA6P05013 189 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 FCGR3AP08637 254 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 NAT1P18440 290 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 HLA-DMAP28067 261 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 OR3A3P47888 321 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 CHRFAM7AQ494W8 412 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 ZNF561Q8N587 486 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 CD177Q8N6Q3 437 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 GVQW1Q8N7I0 195 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 OR4K15Q8NH41 348 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 CHPT1Q8WUD6 406 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 DYRK2Q92630 601 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 HDHD3Q9BSH5 251 aaPredicted RBP12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 DNTTIP1Q9H147 329 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 PPA2Q9H2U2 334 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 ZNF665Q9H7R5 613 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 ZNF286AQ9HBT8 521 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 HRASLSQ9HDD0 168 aa12.69□□□□□ -0.38
TMEM39A-203ENST00000461654 TMEM30CPA0ZSE6 113 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 FUOMA2VDF0 154 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 DISC1C4P0D8 188 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 RNF223E7ERA6 249 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 NDUFA2O43678 99 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 ZNF205O95201 554 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 MT-ND4P03905 459 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 CD3DP04234 171 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 DAOP14920 347 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 DSCR9P59020 149 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 ARPC4P59998 168 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 HOXA4Q00056 320 aaPredicted RBP12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 GRK1Q15835 563 aa12.68□□□□□ -0.38
TMEM39A-203ENST00000461654 FAM201AQ5SY85 155 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms