RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 SDF2L1Q9HCN8 221 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 ALKBH4Q9NXW9 302 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 LRFN1Q9P244 771 aa13.42□□□□□ -0.26
SSR4-206ENST00000460616 C3orf85A0A1B0GTC6 90 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 ZFP92A6NM28 416 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 TRDCB7Z8K6 153 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 TK1P04183 234 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 CTSEP14091 401 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 ZFP36L1Q07352 338 aaKnown RBP13.41□□□□□ -0.26
SSR4-206ENST00000460616 NSDHLQ15738 373 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 MPV17LQ2QL34 196 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 CXorf66Q5JRM2 361 aaPredicted RBP13.41□□□□□ -0.26
SSR4-206ENST00000460616 UEVLDQ8IX04 471 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 NOXO1Q8NFA2 376 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 SNHG12Q9BXW3 62 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 CTDSP1Q9GZU7 261 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 PIGLQ9Y2B2 252 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 R4GN57 208 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 CACNA1HO95180 2353 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 ANKUB1A6NFN9 424 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 VSTM2BA6NLU5 285 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 B4DGG1 531 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 DHRS3O75911 302 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 MOB3AQ96BX8 217 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 CISD1Q9NZ45 108 aaKnown RBP13.41□□□□□ -0.26
SSR4-206ENST00000460616 ZNF581Q9P0T4 197 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 CABIN1Q9Y6J0 2220 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 GPR179Q6PRD1 2367 aa13.41□□□□□ -0.26
SSR4-206ENST00000460616 TRAV1-1A0A0B4J248 108 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 A0A1W2PNV4 684 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 SHISA8B8ZZ34 492 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 F5H5K5 113 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 UCP3P55916 312 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 CLN3Q13286 438 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 BRICD5Q6PL45 260 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 SLC25A47Q6Q0C1 308 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 OR1N1Q8NGS0 311 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 DYRK2Q92630 601 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 ZNF160Q9HCG1 818 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 VAX2Q9UIW0 290 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 MPPED1O15442 326 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 ANGPTL7O43827 346 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 MTCP1P56278 107 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 TAS2R30P59541 319 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 COA6Q5JTJ3 125 aaKnown RBP13.4□□□□□ -0.26
SSR4-206ENST00000460616 C1orf189Q5VU69 101 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 SLC25A26Q70HW3 274 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 ZNF695Q8IW36 515 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 ODF3L1Q8IXM7 274 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 PRSS58Q8IYP2 241 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 H1FOOQ8IZA3 346 aaPredicted RBP13.4□□□□□ -0.26
SSR4-206ENST00000460616 IL22RA1Q8N6P7 574 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 ADGRG7Q96K78 797 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 GAB2Q9UQC2 676 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 V9GYS6 101 aa13.4□□□□□ -0.26
SSR4-206ENST00000460616 PATE3B3GLJ2 98 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 M0R143 59 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 IGLV3-1P01715 115 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 NR2C1P13056 603 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 RAB4AP20338 218 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 EFNA3P52797 238 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 NXPH1P58417 271 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 HERV-K104P61576 105 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 SRPXP78539 464 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 BAXQ07812 192 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 C17orf67Q0P5P2 114 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 ZNF154Q13106 437 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 HNF4GQ14541 408 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 C20orf196Q8IYI0 205 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 SPIN2AQ99865 258 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 SPIN2BQ9BPZ2 258 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 LRRC61Q9BV99 259 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 TMEM222Q9H0R3 208 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 PILRBQ9UKJ0 227 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 UBE2J1Q9Y385 318 aaPredicted RBP13.39□□□□□ -0.27
SSR4-206ENST00000460616 TMEM50AO95807 157 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 OPN1LWP04000 364 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 BCL2P10415 239 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 MMP9P14780 707 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 ZNF25P17030 456 aaPredicted RBP13.39□□□□□ -0.27
SSR4-206ENST00000460616 PAX5Q02548 391 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 MYBPHQ13203 477 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 DTX1Q86Y01 620 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 THNSL2Q86YJ6 484 aa13.39□□□□□ -0.27
SSR4-206ENST00000460616 CD55P08174 381 aa13.38□□□□□ -0.27
SSR4-206ENST00000460616 OR4A8P0C604 315 aa13.38□□□□□ -0.27
SSR4-206ENST00000460616 AADACP22760 399 aa13.38□□□□□ -0.27
SSR4-206ENST00000460616 CTSSP25774 331 aa13.38□□□□□ -0.27
SSR4-206ENST00000460616 ZNF66Q6ZN08 573 aa13.38□□□□□ -0.27
SSR4-206ENST00000460616 C16orf47Q6ZP98 133 aaPredicted RBP13.38□□□□□ -0.27
SSR4-206ENST00000460616 GPR137CQ8N3F9 429 aa13.38□□□□□ -0.27
SSR4-206ENST00000460616 ZNF441Q8N8Z8 693 aa13.38□□□□□ -0.27
SSR4-206ENST00000460616 ATP5SQ99766 215 aa13.38□□□□□ -0.27
SSR4-206ENST00000460616 IGHV5-51A0A0C4DH38 117 aa13.38□□□□□ -0.27
SSR4-206ENST00000460616 A0A0U1RQV5 110 aa13.38□□□□□ -0.27
SSR4-206ENST00000460616 PRR33A8MZF0 331 aa13.38□□□□□ -0.27
SSR4-206ENST00000460616 SLC33A1O00400 549 aaPredicted RBP13.38□□□□□ -0.27
SSR4-206ENST00000460616 ADAM20O43506 726 aa13.38□□□□□ -0.27
SSR4-206ENST00000460616 GALR2O43603 387 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms