RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 SLC29A1Q99808 456 aa18.21■□□□□ 0.51
PTPN4-207ENST00000460162 NCOR1P1Q9H4R4 102 aa18.21■□□□□ 0.51
PTPN4-207ENST00000460162 ING3Q9NXR8 418 aa18.21■□□□□ 0.51
PTPN4-207ENST00000460162 GABRPO00591 440 aa18.2■□□□□ 0.5
PTPN4-207ENST00000460162 MAGEB3O15480 346 aa18.2■□□□□ 0.5
PTPN4-207ENST00000460162 CD24P25063 80 aa18.2■□□□□ 0.5
PTPN4-207ENST00000460162 MNDAP41218 407 aa18.2■□□□□ 0.5
PTPN4-207ENST00000460162 GLP1RP43220 463 aa18.2■□□□□ 0.5
PTPN4-207ENST00000460162 CD83Q01151 205 aa18.2■□□□□ 0.5
PTPN4-207ENST00000460162 PAX5Q02548 391 aa18.2■□□□□ 0.5
PTPN4-207ENST00000460162 PAN3Q58A45 887 aaKnown RBP18.2■□□□□ 0.5
PTPN4-207ENST00000460162 PQLC1Q8N2U9 271 aa18.2■□□□□ 0.5
PTPN4-207ENST00000460162 OR5AU1Q8NGC0 362 aa18.2■□□□□ 0.5
PTPN4-207ENST00000460162 OR9G1Q8NH87 305 aa18.2■□□□□ 0.5
PTPN4-207ENST00000460162 TNFAIP8L1Q8WVP5 186 aa18.2■□□□□ 0.5
PTPN4-207ENST00000460162 GPER1Q99527 375 aa18.2■□□□□ 0.5
PTPN4-207ENST00000460162 S100A14Q9HCY8 104 aa18.2■□□□□ 0.5
PTPN4-207ENST00000460162 FAM118AQ9NWS6 357 aa18.2■□□□□ 0.5
PTPN4-207ENST00000460162 LY6LH3BQJ8 138 aa18.19■□□□□ 0.5
PTPN4-207ENST00000460162 HSPB6O14558 160 aa18.19■□□□□ 0.5
PTPN4-207ENST00000460162 CD2P06729 351 aa18.19■□□□□ 0.5
PTPN4-207ENST00000460162 LIMS3P0CW19 117 aa18.19■□□□□ 0.5
PTPN4-207ENST00000460162 LIMS4P0CW20 117 aa18.19■□□□□ 0.5
PTPN4-207ENST00000460162 KCNJ3P48549 501 aa18.19■□□□□ 0.5
PTPN4-207ENST00000460162 ZSCAN26Q16670 478 aa18.19■□□□□ 0.5
PTPN4-207ENST00000460162 ZNF565Q8N9K5 539 aa18.19■□□□□ 0.5
PTPN4-207ENST00000460162 OR51A2Q8NGJ7 313 aa18.19■□□□□ 0.5
PTPN4-207ENST00000460162 CNIH3Q8TBE1 160 aa18.19■□□□□ 0.5
PTPN4-207ENST00000460162 RGP1Q92546 391 aaPredicted RBP18.19■□□□□ 0.5
PTPN4-207ENST00000460162 PCDHB16Q9NRJ7 776 aa18.19■□□□□ 0.5
PTPN4-207ENST00000460162 CALYQ9NYX4 217 aa18.19■□□□□ 0.5
PTPN4-207ENST00000460162 KIF25Q9UIL4 384 aa18.19■□□□□ 0.5
PTPN4-207ENST00000460162 AMMECR1Q9Y4X0 333 aaPredicted RBP18.19■□□□□ 0.5
PTPN4-207ENST00000460162 TRAV24A0A0B4J272 114 aa18.18■□□□□ 0.5
PTPN4-207ENST00000460162 M0QZK8 103 aa18.18■□□□□ 0.5
PTPN4-207ENST00000460162 NFYBP25208 207 aa18.18■□□□□ 0.5
PTPN4-207ENST00000460162 OR3A4PP47883 348 aa18.18■□□□□ 0.5
PTPN4-207ENST00000460162 RBM39Q14498 530 aaKnown RBP18.18■□□□□ 0.5
PTPN4-207ENST00000460162 CCDC58Q4VC31 144 aa18.18■□□□□ 0.5
PTPN4-207ENST00000460162 ABCA11PQ4W5N1 156 aa18.18■□□□□ 0.5
PTPN4-207ENST00000460162 Q8NFD4 153 aa18.18■□□□□ 0.5
PTPN4-207ENST00000460162 OR13A1Q8NGR1 328 aa18.18■□□□□ 0.5
PTPN4-207ENST00000460162 GPR148Q8TDV2 347 aa18.18■□□□□ 0.5
PTPN4-207ENST00000460162 RDH12Q96NR8 316 aa18.18■□□□□ 0.5
PTPN4-207ENST00000460162 BARHL1Q9BZE3 327 aa18.18■□□□□ 0.5
PTPN4-207ENST00000460162 FAM192AQ9GZU8 254 aa18.18■□□□□ 0.5
PTPN4-207ENST00000460162 LINC00574Q9H8X3 128 aa18.18■□□□□ 0.5
PTPN4-207ENST00000460162 FGF20Q9NP95 211 aaPredicted RBP18.18■□□□□ 0.5
PTPN4-207ENST00000460162 TAS2R4Q9NYW5 299 aa18.18■□□□□ 0.5
PTPN4-207ENST00000460162 MEIKINA0A087WXM9 373 aa18.17■□□□□ 0.5
PTPN4-207ENST00000460162 IL1AP01583 271 aa18.17■□□□□ 0.5
PTPN4-207ENST00000460162 CGB3P0DN86 165 aa18.17■□□□□ 0.5
PTPN4-207ENST00000460162 CGB7P0DN87 165 aa18.17■□□□□ 0.5
PTPN4-207ENST00000460162 SOX2P48431 317 aa18.17■□□□□ 0.5
PTPN4-207ENST00000460162 GTF2A1P52655 376 aaPredicted RBP18.17■□□□□ 0.5
PTPN4-207ENST00000460162 FBLN7Q53RD9 439 aa18.17■□□□□ 0.5
PTPN4-207ENST00000460162 OXLD1Q5BKU9 147 aa18.17■□□□□ 0.5
PTPN4-207ENST00000460162 RPL22L1Q6P5R6 122 aaKnown RBP18.17■□□□□ 0.5
PTPN4-207ENST00000460162 TOMM40LQ969M1 308 aa18.17■□□□□ 0.5
PTPN4-207ENST00000460162 RPEQ96AT9 228 aa18.17■□□□□ 0.5
PTPN4-207ENST00000460162 NR1H4Q96RI1 486 aaPredicted RBP18.17■□□□□ 0.5
PTPN4-207ENST00000460162 AMY1AP04745 511 aa18.16■□□□□ 0.5
PTPN4-207ENST00000460162 AMY2AP04746 511 aa18.16■□□□□ 0.5
PTPN4-207ENST00000460162 LPLP06858 475 aa18.16■□□□□ 0.5
PTPN4-207ENST00000460162 C21orf33P30042 268 aaPredicted RBP18.16■□□□□ 0.5
PTPN4-207ENST00000460162 RSU1Q15404 277 aa18.16■□□□□ 0.5
PTPN4-207ENST00000460162 RSBN1Q5VWQ0 802 aaPredicted RBP18.16■□□□□ 0.5
PTPN4-207ENST00000460162 ASCL4Q6XD76 172 aa18.16■□□□□ 0.5
PTPN4-207ENST00000460162 CENPVQ7Z7K6 275 aaPredicted RBP18.16■□□□□ 0.5
PTPN4-207ENST00000460162 SATL1Q86VE3 508 aa18.16■□□□□ 0.5
PTPN4-207ENST00000460162 OR4X2Q8NGF9 303 aa18.16■□□□□ 0.5
PTPN4-207ENST00000460162 TMEM106AQ96A25 262 aa18.16■□□□□ 0.5
PTPN4-207ENST00000460162 NECAP2Q9NVZ3 263 aa18.16■□□□□ 0.5
PTPN4-207ENST00000460162 SMPD3Q9NY59 655 aaPredicted RBP18.16■□□□□ 0.5
PTPN4-207ENST00000460162 IL36GQ9NZH8 169 aa18.16■□□□□ 0.5
PTPN4-207ENST00000460162 IRGMA1A4Y4 181 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 WBP4O75554 376 aaKnown RBP18.15■□□□□ 0.5
PTPN4-207ENST00000460162 PRB2P02812 416 aaPredicted RBP18.15■□□□□ 0.5
PTPN4-207ENST00000460162 PF4V1P10720 104 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 DCKP27707 260 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 PPP3R1P63098 170 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 PIGYQ3MUY2 71 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 NHLRC3Q5JS37 347 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 UTF1Q5T230 341 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 XAF1Q6GPH4 301 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 TMPRSS11AQ6ZMR5 421 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 Q6ZPA2 131 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 ZNF555Q8NEP9 628 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 OR10A7Q8NGE5 316 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 OR10K1Q8NGX5 313 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 PHF21AQ96BD5 680 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 IDI2-AS1Q9NZ38 188 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 MOB4Q9Y3A3 225 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 TSSC4Q9Y5U2 329 aaPredicted RBP18.15■□□□□ 0.5
PTPN4-207ENST00000460162 HSPE1-MOB4S4R3N1 261 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 DNAH3Q8TD57 4116 aa18.15■□□□□ 0.5
PTPN4-207ENST00000460162 A0A1W2PRX2 142 aa18.14■□□□□ 0.49
PTPN4-207ENST00000460162 NPIPB11E5RHQ5 1161 aa18.14■□□□□ 0.49
PTPN4-207ENST00000460162 J3QR06 171 aa18.14■□□□□ 0.49
PTPN4-207ENST00000460162 PIN1P1O15428 100 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms