RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 C1RLQ9NZP8 487 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 VPREB3Q9UKI3 123 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 FOXJ3Q9UPW0 622 aa15.19■□□□□ 0.02
USP39-209ENST00000458268 UBE2J1Q9Y385 318 aaPredicted RBP15.19■□□□□ 0.02
USP39-209ENST00000458268 TRAV39A0A0B4J263 110 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 TRAV24A0A0B4J272 114 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 GEMIN2O14893 280 aaKnown RBP15.18■□□□□ 0.02
USP39-209ENST00000458268 NFYBP25208 207 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 RBM11P57052 281 aaKnown RBP15.18■□□□□ 0.02
USP39-209ENST00000458268 IRF3Q14653 427 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 SSX2Q16385 188 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 BRICD5Q6PL45 260 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 GDPGP1Q6ZNW5 385 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 SUMF2Q8NBJ7 301 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 OR51T1Q8NGJ9 327 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 PLPPR1Q8TBJ4 325 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 THRSPQ92748 146 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 TMEM133Q9H2Q1 129 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 BANF2Q9H503 90 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 DUSP21Q9H596 190 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 RAB26Q9ULW5 256 aa15.18■□□□□ 0.02
USP39-209ENST00000458268 IGHV2-26A0A0B4J1V2 119 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 GPX5O75715 221 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 CRTAPO75718 401 aaPredicted RBP15.17■□□□□ 0.02
USP39-209ENST00000458268 RBP4P02753 201 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 CD1AP06126 327 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 GTF2F2P13984 249 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 GDNFP39905 211 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 RPS25P62851 125 aaKnown RBP15.17■□□□□ 0.02
USP39-209ENST00000458268 RNLSQ5VYX0 342 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 ASCL4Q6XD76 172 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 MS4A15Q8N5U1 240 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 OR4D6Q8NGJ1 314 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 OR4F5Q8NH21 305 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 OR5R1Q8NH85 324 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 MRGPRDQ8TDS7 321 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 FAM46BQ96A09 425 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 DPCDQ9BVM2 203 aaPredicted RBP15.17■□□□□ 0.02
USP39-209ENST00000458268 CLEC7AQ9BXN2 247 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 BARHL1Q9BZE3 327 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 BEX1Q9HBH7 125 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 PCDHB16Q9NRJ7 776 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 ABCB10Q9NRK6 738 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 IL36GQ9NZH8 169 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 BLOC1S6Q9UL45 172 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 HILPDAQ9Y5L2 63 aa15.17■□□□□ 0.02
USP39-209ENST00000458268 TENM1Q9UKZ4 2725 aa15.16■□□□□ 0.02
USP39-209ENST00000458268 ZNF780AO75290 641 aaPredicted RBP15.16■□□□□ 0.02
USP39-209ENST00000458268 IGHV3-7P01780 117 aa15.16■□□□□ 0.02
USP39-209ENST00000458268 RAB13P51153 203 aa15.16■□□□□ 0.02
USP39-209ENST00000458268 RELBQ01201 579 aa15.16■□□□□ 0.02
USP39-209ENST00000458268 RBM39Q14498 530 aaKnown RBP15.16■□□□□ 0.02
USP39-209ENST00000458268 HSD17B12Q53GQ0 312 aa15.16■□□□□ 0.02
USP39-209ENST00000458268 PRSS48Q7RTY5 328 aa15.16■□□□□ 0.02
USP39-209ENST00000458268 DYNAPQ8N1N2 210 aa15.16■□□□□ 0.02
USP39-209ENST00000458268 NKAIN3Q8N8D7 197 aa15.16■□□□□ 0.02
USP39-209ENST00000458268 OR13A1Q8NGR1 328 aa15.16■□□□□ 0.02
USP39-209ENST00000458268 SELENOIQ9C0D9 397 aa15.16■□□□□ 0.02
USP39-209ENST00000458268 OR6C3Q9NZP0 311 aa15.16■□□□□ 0.02
USP39-209ENST00000458268 ODF3BA8MYP8 253 aa15.15■□□□□ 0.02
USP39-209ENST00000458268 CSN2P05814 226 aa15.15■□□□□ 0.02
USP39-209ENST00000458268 JUNBP17275 347 aaPredicted RBP15.15■□□□□ 0.02
USP39-209ENST00000458268 GPR50Q13585 617 aa15.15■□□□□ 0.02
USP39-209ENST00000458268 GPR176Q14439 515 aa15.15■□□□□ 0.02
USP39-209ENST00000458268 ZNF626Q68DY1 528 aa15.15■□□□□ 0.02
USP39-209ENST00000458268 ABHD12Q8N2K0 398 aa15.15■□□□□ 0.02
USP39-209ENST00000458268 RFESDQ8TAC1 157 aa15.15■□□□□ 0.02
USP39-209ENST00000458268 UBALD1Q8TB05 177 aa15.15■□□□□ 0.02
USP39-209ENST00000458268 CCDC107Q8WV48 283 aa15.15■□□□□ 0.02
USP39-209ENST00000458268 FOXRED1Q96CU9 486 aaPredicted RBP15.15■□□□□ 0.02
USP39-209ENST00000458268 AJUBAQ96IF1 538 aa15.15■□□□□ 0.02
USP39-209ENST00000458268 Q9H521 79 aa15.15■□□□□ 0.02
USP39-209ENST00000458268 TAS2R3Q9NYW6 316 aa15.15■□□□□ 0.02
USP39-209ENST00000458268 RRP15Q9Y3B9 282 aaKnown RBP15.15■□□□□ 0.02
USP39-209ENST00000458268 TBL2Q9Y4P3 447 aaKnown RBP15.15■□□□□ 0.02
USP39-209ENST00000458268 ZNF729A6NN14 1252 aaPredicted RBP15.14■□□□□ 0.01
USP39-209ENST00000458268 TOR1AO14656 332 aa15.14■□□□□ 0.01
USP39-209ENST00000458268 MGMTP16455 207 aa15.14■□□□□ 0.01
USP39-209ENST00000458268 OR52W1Q6IF63 320 aa15.14■□□□□ 0.01
USP39-209ENST00000458268 OR11H6Q8NGC7 330 aa15.14■□□□□ 0.01
USP39-209ENST00000458268 MGLLQ99685 303 aa15.14■□□□□ 0.01
USP39-209ENST00000458268 KCNK15Q9H427 330 aa15.14■□□□□ 0.01
USP39-209ENST00000458268 ZNF286AQ9HBT8 521 aa15.14■□□□□ 0.01
USP39-209ENST00000458268 CALYQ9NYX4 217 aa15.14■□□□□ 0.01
USP39-209ENST00000458268 MPIG6BO95866 241 aa15.13■□□□□ 0.01
USP39-209ENST00000458268 LDLRAD2Q5SZI1 272 aa15.13■□□□□ 0.01
USP39-209ENST00000458268 RSBN1Q5VWQ0 802 aaPredicted RBP15.13■□□□□ 0.01
USP39-209ENST00000458268 GLT8D1Q68CQ7 371 aa15.13■□□□□ 0.01
USP39-209ENST00000458268 UNQ9370/PRO34162Q6UXP9 181 aa15.13■□□□□ 0.01
USP39-209ENST00000458268 HEPN1Q6WQI6 88 aa15.13■□□□□ 0.01
USP39-209ENST00000458268 Q6ZSV7 163 aa15.13■□□□□ 0.01
USP39-209ENST00000458268 Q8NFD4 153 aa15.13■□□□□ 0.01
USP39-209ENST00000458268 CORO2AQ92828 525 aa15.13■□□□□ 0.01
USP39-209ENST00000458268 LEAP2Q969E1 77 aa15.13■□□□□ 0.01
USP39-209ENST00000458268 ZNF747Q9BV97 191 aa15.13■□□□□ 0.01
USP39-209ENST00000458268 MEGF9Q9H1U4 602 aa15.13■□□□□ 0.01
USP39-209ENST00000458268 TMEM30CPA0ZSE6 113 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 MEGF11A6BM72 1044 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 F2RL2O00254 374 aa15.12■□□□□ 0.01
USP39-209ENST00000458268 HTR1DP28221 377 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms