RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 SYTL3Q4VX76 610 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 Q5BKY6 102 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 TREML2Q5T2D2 321 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 SPSB3Q6PJ21 355 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 SLC25A47Q6Q0C1 308 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 DHRS11Q6UWP2 260 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 FBXW12Q6X9E4 464 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 Q71RC1 249 aaPredicted RBP4.57□□□□□ -1.68
VPS41-209ENST00000457055 ZNF534Q76KX8 674 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 OR4N5Q8IXE1 308 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 KLHDC8BQ8IXV7 354 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 OR8I2Q8N0Y5 310 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 GPD1LQ8N335 351 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 TPRX1Q8N7U7 411 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 PRSS33Q8NF86 280 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 OR1S2Q8NGQ3 325 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 CNIH3Q8TBE1 160 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 CRYGNQ8WXF5 182 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 DCUN1D1Q96GG9 259 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 WDYHV1Q96HA8 205 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 ADGRG7Q96K78 797 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 RPP25Q9BUL9 199 aaKnown RBP4.57□□□□□ -1.68
VPS41-209ENST00000457055 EBPLQ9BY08 206 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 ZNF436Q9C0F3 470 aaPredicted RBP4.57□□□□□ -1.68
VPS41-209ENST00000457055 C20orf27Q9GZN8 174 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 LPAR5Q9H1C0 372 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 PRO1933Q9H354 126 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 IDI2-AS1Q9NZ38 188 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 THYN1Q9P016 225 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 KLHL13Q9P2N7 655 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 TMED3Q9Y3Q3 217 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 OR51B2Q9Y5P1 312 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 ZNF780BQ9Y6R6 833 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 PHIPQ8WWQ0 1821 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 FAM186AA6NE01 2351 aa4.57□□□□□ -1.68
VPS41-209ENST00000457055 MAP1BP46821 2468 aaKnown RBP4.56□□□□□ -1.68
VPS41-209ENST00000457055 A0A0G2JMZ2 1700 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 ARAP2Q8WZ64 1704 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 TRAV38-1A0A0B4J264 116 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 A0A0U1RQF3 1178 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 PRSS51A0A1B0GVH4 220 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 A0A1B0GX51 115 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 A0A1W2PPI3 338 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 IFITM5A6NNB3 132 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 ZNF726A6NNF4 738 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 E7ENX8 843 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 F5H5K5 113 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 J3KR12 359 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 M0R2Z0 102 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 HSPB6O14558 160 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 EFNA2O43921 213 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 HPRT1P00492 218 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 SEMG1P04279 462 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 GYPCP04921 128 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 FGF2P09038 288 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 CT45A6P0DMU7 189 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 CT45A5P0DMU8 189 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 CT45A7P0DMV0 189 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 PSG2P11465 335 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 LOXP28300 417 aaPredicted RBP4.56□□□□□ -1.68
VPS41-209ENST00000457055 HOXD3P31249 432 aaPredicted RBP4.56□□□□□ -1.68
VPS41-209ENST00000457055 EMDP50402 254 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 HCCSP53701 268 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 EMP1P54849 157 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 RPL27P61353 136 aaKnown RBP4.56□□□□□ -1.68
VPS41-209ENST00000457055 HSPE1P61604 102 aaKnown RBP4.56□□□□□ -1.68
VPS41-209ENST00000457055 NCS1P62166 190 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 ST3GAL4Q11206 333 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 OR1C1Q15619 314 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 SSX1Q16384 188 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 ZNF404Q494X3 552 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 CT45A1Q5HYN5 189 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 NHLRC3Q5JS37 347 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 ZNF626Q68DY1 528 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 SFRP4Q6FHJ7 346 aaPredicted RBP4.56□□□□□ -1.68
VPS41-209ENST00000457055 BCDIN3DQ7Z5W3 292 aaKnown RBP4.56□□□□□ -1.68
VPS41-209ENST00000457055 VKORC1L1Q8N0U8 176 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 SVBPQ8N300 66 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 C15orf54Q8N8G6 183 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 ADAD2Q8NCV1 583 aaKnown RBP4.56□□□□□ -1.68
VPS41-209ENST00000457055 OR4K1Q8NGD4 311 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 OR13C8Q8NGS7 320 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 OR2K2Q8NGT1 345 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 OR2G2Q8NGZ5 317 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 OR5W2Q8NH69 310 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 CT45A3Q8NHU0 189 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 VN1R17PQ8TDU5 208 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 ZNF418Q8TF45 676 aaPredicted RBP4.56□□□□□ -1.68
VPS41-209ENST00000457055 GATAD1Q8WUU5 269 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 MBD3L1Q8WWY6 194 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 TSACCQ96A04 125 aaPredicted RBP4.56□□□□□ -1.68
VPS41-209ENST00000457055 HSFY1Q96LI6 401 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 RNF157Q96PX1 679 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 GABRG3Q99928 467 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 MACROD1Q9BQ69 325 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 NRIP2Q9BQI9 281 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 SMIM3Q9BZL3 60 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 SRMSQ9H3Y6 488 aa4.56□□□□□ -1.68
VPS41-209ENST00000457055 METTL17Q9H7H0 456 aaPredicted RBP4.56□□□□□ -1.68
VPS41-209ENST00000457055 ZNF665Q9H7R5 613 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms