RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 IGHV3-72A0A0B4J1Y9 119 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 IGKV1-9A0A0C4DH69 117 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 IGKV1-12A0A0C4DH73 117 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 SLC33A1O00400 549 aaPredicted RBP18.11■□□□□ 0.49
PTPRA-208ENST00000455631 HSD17B6O14756 317 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 PRKYO43930 277 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 IGKV1D-12P01611 117 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 OR8U8P0C7N1 319 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 VDAC1P21796 283 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 MNAT1P51948 309 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 PDZK1IP1Q13113 114 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 LHFPL2Q6ZUX7 228 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 SSX6Q7RTT6 188 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 MOB3BQ86TA1 216 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 CHST4Q8NCG5 386 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 OR10X1Q8NGY0 326 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 C10orf35Q96D05 121 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 EAF1Q96JC9 268 aaPredicted RBP18.11■□□□□ 0.49
PTPRA-208ENST00000455631 TBX5Q99593 518 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 KRT84Q9NSB2 600 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 IDI2-AS1Q9NZ38 188 aa18.11■□□□□ 0.49
PTPRA-208ENST00000455631 LOC107986453A0A1B0GWG9 222 aa18.1■□□□□ 0.49
PTPRA-208ENST00000455631 HSPB6O14558 160 aa18.1■□□□□ 0.49
PTPRA-208ENST00000455631 PRKACGP22612 351 aa18.1■□□□□ 0.49
PTPRA-208ENST00000455631 Q8N9W7 124 aa18.1■□□□□ 0.49
PTPRA-208ENST00000455631 NKX1-2Q9UD57 310 aaPredicted RBP18.1■□□□□ 0.49
PTPRA-208ENST00000455631 HYDINQ4G0P3 5121 aa18.1■□□□□ 0.49
PTPRA-208ENST00000455631 M0R129 80 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 MPZL2O60487 215 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 KDM4BO94953 1096 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 IGHG4P01861 327 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 PRKACBP22694 351 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 REG1BP48304 166 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 MS4A2Q01362 244 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 CFHR3Q02985 330 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 EBI3Q14213 229 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 Q6P435 159 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 ZNF429Q86V71 674 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 ZNF565Q8N9K5 539 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 OR5D18Q8NGL1 313 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 OR13A1Q8NGR1 328 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 ADAT3Q96EY9 351 aaPredicted RBP18.09■□□□□ 0.49
PTPRA-208ENST00000455631 H2AFY2Q9P0M6 372 aaPredicted RBP18.09■□□□□ 0.49
PTPRA-208ENST00000455631 CSMD3Q7Z407 3707 aa18.09■□□□□ 0.49
PTPRA-208ENST00000455631 MEIKINA0A087WXM9 373 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 IGHV1-3A0A0C4DH29 117 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 A0A1W2PPE3 182 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 DEGS1O15121 323 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 IL1AP01583 271 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 OCM2P0CE71 109 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 OCMP0CE72 109 aaPredicted RBP18.08■□□□□ 0.48
PTPRA-208ENST00000455631 CGB3P0DN86 165 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 CGB7P0DN87 165 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 ANXA8P13928 327 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 SPNP16150 400 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 ATF1P18846 271 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 ASPHD1Q5U4P2 390 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 IZUMO1Q8IYV9 350 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 OR1N2Q8NGR9 330 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 LRGUKQ96M69 825 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 OPALINQ96PE5 141 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 OSBPL10Q9BXB5 764 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 EDA2RQ9HAV5 297 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 NEK6Q9HC98 313 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 KIF25Q9UIL4 384 aa18.08■□□□□ 0.48
PTPRA-208ENST00000455631 SAP30O75446 220 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 GP9P14770 177 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 PSMB8P28062 276 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 CRISP1P54107 249 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 ZNF616Q08AN1 781 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 ZNF816Q0VGE8 651 aaPredicted RBP18.07■□□□□ 0.48
PTPRA-208ENST00000455631 TRIM25Q14258 630 aaKnown RBP18.07■□□□□ 0.48
PTPRA-208ENST00000455631 RDH10Q8IZV5 341 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 Q8N6K4 173 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 OR2T10Q8NGZ9 312 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 RFESDQ8TAC1 157 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 SPSB1Q96BD6 273 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 RASL11BQ9BPW5 248 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 HSPB9Q9BQS6 159 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 TM2D3Q9BRN9 247 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 PRRG3Q9BZD7 231 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 GNB4Q9HAV0 340 aa18.07■□□□□ 0.48
PTPRA-208ENST00000455631 TRIM64CA6NLI5 447 aa18.06■□□□□ 0.48
PTPRA-208ENST00000455631 GAPDHP04406 335 aaKnown RBP18.06■□□□□ 0.48
PTPRA-208ENST00000455631 UBCP0CG48 685 aaKnown RBP18.06■□□□□ 0.48
PTPRA-208ENST00000455631 ZNF20P17024 532 aa18.06■□□□□ 0.48
PTPRA-208ENST00000455631 C21orf33P30042 268 aaPredicted RBP18.06■□□□□ 0.48
PTPRA-208ENST00000455631 PRSS35Q8N3Z0 413 aa18.06■□□□□ 0.48
PTPRA-208ENST00000455631 OR51T1Q8NGJ9 327 aa18.06■□□□□ 0.48
PTPRA-208ENST00000455631 KCTD7Q96MP8 289 aa18.06■□□□□ 0.48
PTPRA-208ENST00000455631 SPACA5Q96QH8 159 aa18.06■□□□□ 0.48
PTPRA-208ENST00000455631 OR5B12Q96R08 314 aa18.06■□□□□ 0.48
PTPRA-208ENST00000455631 METTL15A6NJ78 407 aa18.05■□□□□ 0.48
PTPRA-208ENST00000455631 OVOL1O14753 267 aa18.05■□□□□ 0.48
PTPRA-208ENST00000455631 SNX3O60493 162 aa18.05■□□□□ 0.48
PTPRA-208ENST00000455631 GABPB1Q06547 395 aaPredicted RBP18.05■□□□□ 0.48
PTPRA-208ENST00000455631 NXNL2Q5VZ03 156 aa18.05■□□□□ 0.48
PTPRA-208ENST00000455631 UTS2BQ765I0 119 aa18.05■□□□□ 0.48
PTPRA-208ENST00000455631 ADGRG5Q8IZF4 528 aa18.05■□□□□ 0.48
PTPRA-208ENST00000455631 MRGPRDQ8TDS7 321 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms