RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 METTL9Q9H1A3 318 aa11.77□□□□□ -0.53
HSPG2-207ENST00000453796 GAL3ST2Q9H3Q3 398 aa11.77□□□□□ -0.53
HSPG2-207ENST00000453796 NCOR1P1Q9H4R4 102 aa11.77□□□□□ -0.53
HSPG2-207ENST00000453796 IFT22Q9H7X7 185 aa11.77□□□□□ -0.53
HSPG2-207ENST00000453796 ZNF581Q9P0T4 197 aa11.77□□□□□ -0.53
HSPG2-207ENST00000453796 FOXJ3Q9UPW0 622 aa11.77□□□□□ -0.53
HSPG2-207ENST00000453796 LSM2Q9Y333 95 aaKnown RBP11.77□□□□□ -0.53
HSPG2-207ENST00000453796 MINOS1-NBL1R4GNA1 71 aa11.77□□□□□ -0.53
HSPG2-207ENST00000453796 PKD1L1Q8TDX9 2849 aa11.76□□□□□ -0.53
HSPG2-207ENST00000453796 HTR3BO95264 441 aa11.76□□□□□ -0.53
HSPG2-207ENST00000453796 CDK2P24941 298 aa11.76□□□□□ -0.53
HSPG2-207ENST00000453796 CD34P28906 385 aa11.76□□□□□ -0.53
HSPG2-207ENST00000453796 RBM11P57052 281 aaKnown RBP11.76□□□□□ -0.53
HSPG2-207ENST00000453796 SLC35A2P78381 396 aa11.76□□□□□ -0.53
HSPG2-207ENST00000453796 C17orf58Q2M2W7 97 aa11.76□□□□□ -0.53
HSPG2-207ENST00000453796 PRAMEF5Q5TYX0 476 aa11.76□□□□□ -0.53
HSPG2-207ENST00000453796 RSBN1Q5VWQ0 802 aaPredicted RBP11.76□□□□□ -0.53
HSPG2-207ENST00000453796 SLC35E4Q6ICL7 350 aa11.76□□□□□ -0.53
HSPG2-207ENST00000453796 OSR2Q8N2R0 312 aa11.76□□□□□ -0.53
HSPG2-207ENST00000453796 OR4P4Q8NGL7 312 aa11.76□□□□□ -0.53
HSPG2-207ENST00000453796 PLPPR1Q8TBJ4 325 aa11.76□□□□□ -0.53
HSPG2-207ENST00000453796 ING4Q9UNL4 249 aa11.76□□□□□ -0.53
HSPG2-207ENST00000453796 ERGIC3Q9Y282 383 aa11.76□□□□□ -0.53
HSPG2-207ENST00000453796 A0A087X0M5 115 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 A0A1B0GX30 115 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 A0A1W2PP11 408 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 A0A1W2PPK0 400 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 ZNF729A6NN14 1252 aaPredicted RBP11.75□□□□□ -0.53
HSPG2-207ENST00000453796 HSPB6O14558 160 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 CHST1O43916 411 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 IGLV1-47P01700 117 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 MYF6P23409 242 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 DYNLT3P51808 116 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 DYNC1I2Q13409 638 aaKnown RBP11.75□□□□□ -0.53
HSPG2-207ENST00000453796 IRF3Q14653 427 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 SSX2Q16385 188 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 PAN3Q58A45 887 aaKnown RBP11.75□□□□□ -0.53
HSPG2-207ENST00000453796 OR52W1Q6IF63 320 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 CCBE1Q6UXH8 406 aaPredicted RBP11.75□□□□□ -0.53
HSPG2-207ENST00000453796 UNQ9370/PRO34162Q6UXP9 181 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 LIAT1Q6ZQX7 453 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 CDH26Q8IXH8 852 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 OR5M11Q96RB7 305 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 MND1Q9BWT6 205 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 ANKRD60Q9BZ19 345 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 ING3Q9NXR8 418 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 OR6C3Q9NZP0 311 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 FBLN5Q9UBX5 448 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 KIF25Q9UIL4 384 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 TCF19Q9Y242 345 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 ST3GAL6Q9Y274 331 aa11.75□□□□□ -0.53
HSPG2-207ENST00000453796 A6NDX4 124 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 ERICH4A6NGS2 130 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 PTGES3LE9PB15 166 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 GEMIN2O14893 280 aaKnown RBP11.74□□□□□ -0.53
HSPG2-207ENST00000453796 CSTBP04080 98 aaKnown RBP11.74□□□□□ -0.53
HSPG2-207ENST00000453796 JUNBP17275 347 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-207ENST00000453796 SERPINA2P20848 420 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 KIR2DS4P43632 304 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 KCNJ3P48549 501 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 RAB13P51153 203 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 GP2P55259 537 aaKnown RBP11.74□□□□□ -0.53
HSPG2-207ENST00000453796 FAM189A2Q15884 450 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 PLA1AQ53H76 456 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 UTF1Q5T230 341 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 BRICD5Q6PL45 260 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 LINC00596Q86U02 117 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 RTN4RL2Q86UN3 420 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 ABHD12Q8N2K0 398 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 SUMF2Q8NBJ7 301 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 OR13A1Q8NGR1 328 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 KIRREL1Q96J84 757 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 DUSP21Q9H596 190 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 RANBP3Q9H6Z4 567 aaPredicted RBP11.74□□□□□ -0.53
HSPG2-207ENST00000453796 LINC00574Q9H8X3 128 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 ZNF286AQ9HBT8 521 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 RAB18Q9NP72 206 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 CKLFQ9UBR5 152 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 MGAM2Q2M2H8 2515 aa11.74□□□□□ -0.53
HSPG2-207ENST00000453796 KBTBD11-OT1A0A1B0GTJ5 212 aa11.73□□□□□ -0.53
HSPG2-207ENST00000453796 H0YHG0 523 aa11.73□□□□□ -0.53
HSPG2-207ENST00000453796 ZNF780AO75290 641 aaPredicted RBP11.73□□□□□ -0.53
HSPG2-207ENST00000453796 SC5DO75845 299 aa11.73□□□□□ -0.53
HSPG2-207ENST00000453796 MAS1P04201 325 aa11.73□□□□□ -0.53
HSPG2-207ENST00000453796 INSL4Q14641 139 aa11.73□□□□□ -0.53
HSPG2-207ENST00000453796 SPHARQ15513 63 aa11.73□□□□□ -0.53
HSPG2-207ENST00000453796 MPV17LQ2QL34 196 aa11.73□□□□□ -0.53
HSPG2-207ENST00000453796 OR4D6Q8NGJ1 314 aa11.73□□□□□ -0.53
HSPG2-207ENST00000453796 THRSPQ92748 146 aa11.73□□□□□ -0.53
HSPG2-207ENST00000453796 MYDGFQ969H8 173 aa11.73□□□□□ -0.53
HSPG2-207ENST00000453796 MUL1Q969V5 352 aa11.73□□□□□ -0.53
HSPG2-207ENST00000453796 DPCDQ9BVM2 203 aaPredicted RBP11.73□□□□□ -0.53
HSPG2-207ENST00000453796 BARHL1Q9BZE3 327 aa11.73□□□□□ -0.53
HSPG2-207ENST00000453796 SCN3BQ9NY72 215 aa11.73□□□□□ -0.53
HSPG2-207ENST00000453796 MRPS28Q9Y2Q9 187 aaKnown RBP11.73□□□□□ -0.53
HSPG2-207ENST00000453796 HILPDAQ9Y5L2 63 aa11.73□□□□□ -0.53
HSPG2-207ENST00000453796 WNK1Q9H4A3 2382 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 MEIKINA0A087WXM9 373 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 FAM172BPA6NC97 362 aa11.72□□□□□ -0.53
HSPG2-207ENST00000453796 FAM90A22PA8MWA6 464 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms