RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 NAPSAO96009 420 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 TFF1P04155 84 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 FOXC1Q12948 553 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 PAN3Q58A45 887 aaKnown RBP10.02□□□□□ -0.81
VTA1-203ENST00000452973 RGS7BPQ6MZT1 257 aaPredicted RBP10.02□□□□□ -0.81
VTA1-203ENST00000452973 PRSS54Q6PEW0 395 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 SEM1Q6ZVN7 128 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 RBPMSQ93062 196 aaKnown RBP10.02□□□□□ -0.81
VTA1-203ENST00000452973 TP53RKQ96S44 253 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 SYT3Q9BQG1 590 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 COQ3Q9NZJ6 369 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 MEMO1Q9Y316 297 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 FAM90A10PA6NDY2 464 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 FAM90A18PA6NE21 464 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 FAM90A16PA6NEW6 464 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 FAM90A20PA6NIJ5 464 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 FAM90A8PA6NJQ4 464 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 FAM90A7PA6NKC0 464 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 FAM90A22PA8MWA6 464 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 FAM90A12PA8MX19 464 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 FAM90A5PA8MXJ8 464 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 FAM90A23PA8MXZ1 464 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 TIMM8AO60220 97 aaPredicted RBP10.02□□□□□ -0.81
VTA1-203ENST00000452973 FAM90A15PP0C7V4 464 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 FAM90A13PP0C7W8 464 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 FAM90A14PP0C7W9 464 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 FAM90A24PP0C7X0 464 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 CBR1P16152 277 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 IQCF2Q8IXL9 164 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 SLC38A6Q8IZM9 456 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.02□□□□□ -0.81
VTA1-203ENST00000452973 GLYATL2Q8WU03 294 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 RASL12Q9NYN1 266 aa10.02□□□□□ -0.81
VTA1-203ENST00000452973 IGKV1D-13A0A0B4J2D9 117 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 IGKV1-13P0DP09 117 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 RAC2P15153 192 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 GNRHRP30968 328 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 TMEM187Q14656 261 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 CCDC36Q8IYA8 594 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 PIK3IP1Q96FE7 263 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 KIRREL1Q96J84 757 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 SMIM3Q9BZL3 60 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 SLC5A7Q9GZV3 580 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 PLK3Q9H4B4 646 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 PLSCR2Q9NRY7 297 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 RCC2Q9P258 522 aaKnown RBP10.01□□□□□ -0.81
VTA1-203ENST00000452973 AUP1Q9Y679 476 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 ROS1P08922 2347 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 IGKV1-6A0A0C4DH72 117 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 TRDCB7Z8K6 153 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 SLC33A1O00400 549 aaPredicted RBP10.01□□□□□ -0.81
VTA1-203ENST00000452973 WNT9BO14905 357 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 ZNF83P51522 516 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 CCDC28AQ8IWP9 274 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 GAPTQ8N292 157 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 MRPL30Q8TCC3 161 aaKnown RBP10.01□□□□□ -0.81
VTA1-203ENST00000452973 CCL28Q9NRJ3 127 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 PLSCR4Q9NRQ2 329 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 TMEM100Q9NV29 134 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 DUSP13Q9UII6 198 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 SH3BGRL2Q9UJC5 107 aa10.01□□□□□ -0.81
VTA1-203ENST00000452973 LRP5LA4QPB2 252 aa10□□□□□ -0.81
VTA1-203ENST00000452973 OR2H2O95918 312 aa10□□□□□ -0.81
VTA1-203ENST00000452973 IGKV3-15P01624 115 aa10□□□□□ -0.81
VTA1-203ENST00000452973 COX5AP20674 150 aa10□□□□□ -0.81
VTA1-203ENST00000452973 PRAMEF6Q5VXH4 476 aa10□□□□□ -0.81
VTA1-203ENST00000452973 TMEM268Q5VZI3 342 aa10□□□□□ -0.81
VTA1-203ENST00000452973 ZNF818PQ6ZRF7 136 aa10□□□□□ -0.81
VTA1-203ENST00000452973 RBMXL3Q8N7X1 1067 aaKnown RBP10□□□□□ -0.81
VTA1-203ENST00000452973 LHFPL5Q8TAF8 219 aa10□□□□□ -0.81
VTA1-203ENST00000452973 LRRC20Q8TCA0 184 aa10□□□□□ -0.81
VTA1-203ENST00000452973 TMED6Q8WW62 240 aa10□□□□□ -0.81
VTA1-203ENST00000452973 SPACA1Q9HBV2 294 aa10□□□□□ -0.81
VTA1-203ENST00000452973 ZNF71Q9NQZ8 489 aaPredicted RBP10□□□□□ -0.81
VTA1-203ENST00000452973 UBE2J1Q9Y385 318 aaPredicted RBP10□□□□□ -0.81
VTA1-203ENST00000452973 ATP23Q9Y6H3 246 aa10□□□□□ -0.81
VTA1-203ENST00000452973 ZGRF1Q86YA3 2104 aa10□□□□□ -0.81
VTA1-203ENST00000452973 KIR2DS1A0A191URI9 304 aa10□□□□□ -0.81
VTA1-203ENST00000452973 PET100P0DJ07 73 aa10□□□□□ -0.81
VTA1-203ENST00000452973 KIR2DS4P43632 304 aa10□□□□□ -0.81
VTA1-203ENST00000452973 SNTB1Q13884 538 aaKnown RBP10□□□□□ -0.81
VTA1-203ENST00000452973 SMCO1Q147U7 214 aa10□□□□□ -0.81
VTA1-203ENST00000452973 KIR2DS1Q14954 304 aa10□□□□□ -0.81
VTA1-203ENST00000452973 VHLLQ6RSH7 139 aa10□□□□□ -0.81
VTA1-203ENST00000452973 BHLHA15Q7RTS1 189 aaPredicted RBP10□□□□□ -0.81
VTA1-203ENST00000452973 TBC1D26Q86UD7 250 aa10□□□□□ -0.81
VTA1-203ENST00000452973 CCDC71LQ8N9Z2 235 aa10□□□□□ -0.81
VTA1-203ENST00000452973 SPERTQ8NA61 448 aa10□□□□□ -0.81
VTA1-203ENST00000452973 PKIBQ9C010 78 aa10□□□□□ -0.81
VTA1-203ENST00000452973 TRAPPC2LQ9UL33 140 aa10□□□□□ -0.81
VTA1-203ENST00000452973 C3orf85A0A1B0GTC6 90 aa10□□□□□ -0.81
VTA1-203ENST00000452973 MPPED1O15442 326 aa10□□□□□ -0.81
VTA1-203ENST00000452973 MLNRO43193 412 aa10□□□□□ -0.81
VTA1-203ENST00000452973 NXPH3O95157 252 aa10□□□□□ -0.81
VTA1-203ENST00000452973 LIAT1Q6ZQX7 453 aa10□□□□□ -0.81
VTA1-203ENST00000452973 SLC35G3Q8N808 338 aa10□□□□□ -0.81
VTA1-203ENST00000452973 OR52M1Q8NGK5 317 aa10□□□□□ -0.81
VTA1-203ENST00000452973 CNTNAP3BQ96NU0 1288 aa10□□□□□ -0.81
VTA1-203ENST00000452973 DHRS9Q9BPW9 319 aa10□□□□□ -0.81
VTA1-203ENST00000452973 CNTNAP3Q9BZ76 1288 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms