RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 C12orf49Q9H741 205 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 METTL8Q9H825 291 aaKnown RBP10.42□□□□□ -0.74
COL27A1-202ENST00000451716 ST3GAL6Q9Y274 331 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 OTOGLQ3ZCN5 2332 aa10.42□□□□□ -0.74
COL27A1-202ENST00000451716 CUL9Q8IWT3 2517 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 CEACAM18A8MTB9 384 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 H0YIZ8 118 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 F12P00748 615 aaPredicted RBP10.41□□□□□ -0.74
COL27A1-202ENST00000451716 PPIAP62937 165 aaKnown RBP10.41□□□□□ -0.74
COL27A1-202ENST00000451716 PEA15Q15121 130 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 ACOT7LQ6ZUV0 252 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 LHFPL2Q6ZUX7 228 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 NUFIP2Q7Z417 695 aaKnown RBP10.41□□□□□ -0.74
COL27A1-202ENST00000451716 TMEM45BQ96B21 275 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 GSKIPQ9P0R6 139 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 COLCA2A8K830 154 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 OR2F2O95006 317 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 NGFP01138 241 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 SP1P08047 785 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 GLI4P10075 376 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 OR2F1Q13607 317 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 OR8B8Q15620 311 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 SLC25A26Q70HW3 274 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 BOLLQ8N9W6 283 aaKnown RBP10.41□□□□□ -0.74
COL27A1-202ENST00000451716 INO80EQ8NBZ0 244 aaPredicted RBP10.41□□□□□ -0.74
COL27A1-202ENST00000451716 PXT1Q8NFP0 134 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 RNASE8Q8TDE3 154 aaKnown RBP10.41□□□□□ -0.74
COL27A1-202ENST00000451716 TOMM40LQ969M1 308 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 RRNAD1Q96FB5 475 aaKnown RBP10.41□□□□□ -0.74
COL27A1-202ENST00000451716 LOXL4Q96JB6 756 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 RNF126Q9BV68 326 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 GAL3ST2Q9H3Q3 398 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 TMEM9BQ9NQ34 198 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 SLC7A11Q9UPY5 501 aa10.41□□□□□ -0.74
COL27A1-202ENST00000451716 F5H0A9 414 aaPredicted RBP10.4□□□□□ -0.74
COL27A1-202ENST00000451716 C3orf80F5H4A9 247 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 BCL2L11O43521 198 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 OR5H8P0DN80 308 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 NFYBP25208 207 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 CHATP28329 748 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 CALCRP30988 508 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 PTGER4P35408 488 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 SRSF6Q13247 344 aaKnown RBP10.4□□□□□ -0.74
COL27A1-202ENST00000451716 C5orf24Q7Z6I8 188 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 OSR2Q8N2R0 312 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 C1QTNF5Q9BXJ0 243 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 RNF122Q9H9V4 155 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 PARD6AQ9NPB6 346 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 ANXA10Q9UJ72 324 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 ZNF816-ZNF321PA0A0X1KG74 233 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 PTBP3O95758 552 aaKnown RBP10.4□□□□□ -0.74
COL27A1-202ENST00000451716 CEACAM6P40199 344 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 CD200P41217 278 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 NPBWR1P48145 328 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 RAB5CP51148 216 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 FUT6P51993 359 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 AKR1C2P52895 323 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 AKR1C1Q04828 323 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 RNFT1Q5M7Z0 435 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 ZNF611Q8N823 705 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 UBAC2Q8NBM4 344 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 OR10A7Q8NGE5 316 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 APH1AQ96BI3 265 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 HS3ST6Q96QI5 342 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 OR5AC2Q9NZP5 309 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 PRSS50Q9UI38 385 aa10.4□□□□□ -0.74
COL27A1-202ENST00000451716 MSGN1A6NI15 193 aa10.4□□□□□ -0.75
COL27A1-202ENST00000451716 AP4M1O00189 453 aa10.4□□□□□ -0.75
COL27A1-202ENST00000451716 OR7C1O76099 320 aaPredicted RBP10.4□□□□□ -0.75
COL27A1-202ENST00000451716 FCGR3AP08637 254 aa10.4□□□□□ -0.75
COL27A1-202ENST00000451716 FXYD4P59646 89 aa10.4□□□□□ -0.75
COL27A1-202ENST00000451716 ZNF345Q14585 488 aa10.4□□□□□ -0.75
COL27A1-202ENST00000451716 SCGB3A2Q96PL1 93 aa10.4□□□□□ -0.75
COL27A1-202ENST00000451716 RGCCQ9H4X1 137 aa10.4□□□□□ -0.75
COL27A1-202ENST00000451716 PARPBPQ9NWS1 579 aa10.4□□□□□ -0.75
COL27A1-202ENST00000451716 SVILO95425 2214 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 F8VVB4 439 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 F8VWA3 439 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 XRCC2O43543 280 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 S100A2P29034 98 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 GPM6AP51674 278 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 RAB1AP62820 205 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 UBA52P62987 128 aaKnown RBP10.39□□□□□ -0.75
COL27A1-202ENST00000451716 GAGE1Q13065 139 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 IGFBP7Q16270 282 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 SP6Q3SY56 376 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 Q6ZPA2 131 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 ZNF100Q8IYN0 542 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 FGF23Q9GZV9 251 aaPredicted RBP10.39□□□□□ -0.75
COL27A1-202ENST00000451716 C14orf166Q9Y224 244 aaKnown RBP10.39□□□□□ -0.75
COL27A1-202ENST00000451716 PTPRZ1P23471 2315 aaPredicted RBP10.39□□□□□ -0.75
COL27A1-202ENST00000451716 A0A1B0GW55 424 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 HEXAP06865 529 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 DUX4L2P0CJ85 424 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 DUX4L3P0CJ86 424 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 DUX4L4P0CJ87 422 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 DUX4L5P0CJ88 424 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 DUX4L6P0CJ89 424 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 DUX4L7P0CJ90 424 aa10.39□□□□□ -0.75
COL27A1-202ENST00000451716 CDC34P49427 236 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms