RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 ALPK2Q86TB3 2170 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 MYOFQ9NZM1 2061 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 SERPINE3A8MV23 424 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 SSSCA1O60232 199 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 IFNA1P01562 189 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 ZNF728P0DKX0 622 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 HOXB2P14652 356 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 ZNF20P17024 532 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 NKX2-1P43699 371 aaPredicted RBP7.48□□□□□ -1.21
LSM5-208ENST00000450169 FGF8P55075 233 aaPredicted RBP7.48□□□□□ -1.21
LSM5-208ENST00000450169 ACKR1Q16570 336 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 AGBL4Q5VU57 503 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 MRGPRGQ86SM5 289 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 WDFY1Q8IWB7 410 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 SHISA5Q8N114 240 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 SUMF1Q8NBK3 374 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 TMEM52Q8NDY8 209 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 OR5L1Q8NGL2 311 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 MSI2Q96DH6 328 aaKnown RBP7.48□□□□□ -1.21
LSM5-208ENST00000450169 COX14Q96I36 57 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 NKX2-4Q9H2Z4 354 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 KIR3DX1Q9H7L2 352 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 THAP10Q9P2Z0 257 aaPredicted RBP7.48□□□□□ -1.21
LSM5-208ENST00000450169 ST3GAL6Q9Y274 331 aa7.48□□□□□ -1.21
LSM5-208ENST00000450169 RBM7Q9Y580 266 aaKnown RBP7.48□□□□□ -1.21
LSM5-208ENST00000450169 A6NCN8 305 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 BMP5P22003 454 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 IL3RAP26951 378 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 BLVRBP30043 206 aaPredicted RBP7.47□□□□□ -1.21
LSM5-208ENST00000450169 COMPP49747 757 aaPredicted RBP7.47□□□□□ -1.21
LSM5-208ENST00000450169 RPL27P61353 136 aaKnown RBP7.47□□□□□ -1.21
LSM5-208ENST00000450169 RPS15AP62244 130 aaKnown RBP7.47□□□□□ -1.21
LSM5-208ENST00000450169 BAXQ07812 192 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 NNATQ16517 81 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 TCTN1Q2MV58 587 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 PHLDA2Q53GA4 152 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 FBXO42Q6P3S6 717 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 LINC00346Q8IVM7 164 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 TMEFF1Q8IYR6 380 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 FAM89BQ8N5H3 189 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 GATSQ8NAP1 163 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 OR2V1Q8NHB1 315 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 NT5CQ8TCD5 201 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 RPUSD4Q96CM3 377 aaKnown RBP7.47□□□□□ -1.21
LSM5-208ENST00000450169 ATP5SQ99766 215 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 PECRQ9BY49 303 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 CST9LQ9H4G1 147 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 PATZ1Q9HBE1 687 aaKnown RBP7.47□□□□□ -1.21
LSM5-208ENST00000450169 CENPMQ9NSP4 180 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 PXMP4Q9Y6I8 212 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 TRAV30A0A087WSZ9 112 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 ZNF320A2RRD8 509 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 NDUFS8O00217 210 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 LATO43561 262 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 FOXS1O43638 330 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 HYPMO75409 117 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 ZNF823P16415 610 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 DTYMKP23919 212 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 CTRLP40313 264 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 SUMO1P63165 101 aaKnown RBP7.47□□□□□ -1.21
LSM5-208ENST00000450169 SPATA45Q537H7 98 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 DGAT2L6Q6ZPD8 337 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 LHFPL4Q7Z7J7 247 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 MCEMP1Q8IX19 187 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 OR5AS1Q8N127 324 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 OR5AU1Q8NGC0 362 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 ZNF519Q8TB69 540 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 WDYHV1Q96HA8 205 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 GPER1Q99527 375 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 LIME1Q9H400 295 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 SLC2A9Q9NRM0 540 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 RPRMQ9NS64 109 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 FAM206AQ9NX38 181 aa7.47□□□□□ -1.21
LSM5-208ENST00000450169 COA3Q9Y2R0 106 aaPredicted RBP7.47□□□□□ -1.21
LSM5-208ENST00000450169 ARID1BQ8NFD5 2236 aaPredicted RBP7.46□□□□□ -1.21
LSM5-208ENST00000450169 DUXBA0A1W2PPF3 345 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 FOXI3A8MTJ6 420 aaPredicted RBP7.46□□□□□ -1.22
LSM5-208ENST00000450169 VSTM5A8MXK1 200 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 MSTNO14793 375 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 PHF1O43189 567 aaPredicted RBP7.46□□□□□ -1.22
LSM5-208ENST00000450169 PDGFBP01127 241 aaPredicted RBP7.46□□□□□ -1.22
LSM5-208ENST00000450169 IFI6P09912 130 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 SMIM10L1P0DMW3 83 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 IGLC2P0DOY2 106 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 IGLC3P0DOY3 106 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 ZNF10P21506 573 aaPredicted RBP7.46□□□□□ -1.22
LSM5-208ENST00000450169 TNFSF4P23510 183 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 BMI1P35226 326 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 EFNA3P52797 238 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 PRR20EP86478 221 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 PRR20CP86479 221 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 PRR20DP86480 221 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 PRR20BP86481 221 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 PRR20AP86496 221 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 MEF2BQ02080 365 aaPredicted RBP7.46□□□□□ -1.22
LSM5-208ENST00000450169 ZNF154Q13106 437 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 ZNF726P1Q15940 193 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 MEX3BQ6ZN04 569 aaKnown RBP7.46□□□□□ -1.22
LSM5-208ENST00000450169 D2HGDHQ8N465 521 aa7.46□□□□□ -1.22
LSM5-208ENST00000450169 OR5D18Q8NGL1 313 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms