RNA–Protein interactions for RNA: ENST00000449771.6

RAPGEF3-205, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 6,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-205ENST00000449771 GEMIN2O14893 280 aaKnown RBP12.31□□□□□ -0.44
RAPGEF3-205ENST00000449771 NEURL1O76050 574 aa12.31□□□□□ -0.44
RAPGEF3-205ENST00000449771 GALP22466 123 aa12.31□□□□□ -0.44
RAPGEF3-205ENST00000449771 RPEL1Q2QD12 228 aa12.31□□□□□ -0.44
RAPGEF3-205ENST00000449771 INO80CQ6PI98 192 aaPredicted RBP12.31□□□□□ -0.44
RAPGEF3-205ENST00000449771 PCGF1Q9BSM1 259 aa12.31□□□□□ -0.44
RAPGEF3-205ENST00000449771 WDR13Q9H1Z4 485 aa12.31□□□□□ -0.44
RAPGEF3-205ENST00000449771 FTH1P19P0C7X4 201 aa12.31□□□□□ -0.44
RAPGEF3-205ENST00000449771 TGIF2LYQ8IUE0 185 aa12.31□□□□□ -0.44
RAPGEF3-205ENST00000449771 C9orf62Q8N4C0 152 aa12.31□□□□□ -0.44
RAPGEF3-205ENST00000449771 MS4A10Q96PG2 267 aa12.31□□□□□ -0.44
RAPGEF3-205ENST00000449771 CD160O95971 181 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 HTR1DP28221 377 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 FGF9P31371 208 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 RPS4XP62701 263 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 HOXA4Q00056 320 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 DHRS2Q13268 280 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 ECSCRQ19T08 205 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 CLN8Q9UBY8 286 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 PRF1P14222 555 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 NXF2Q9GZY0 626 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 MRPS18BQ9Y676 258 aaKnown RBP12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 SCAND1P57086 179 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 NAAAQ02083 359 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 IL13RA2Q14627 380 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 PET117Q6UWS5 81 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 C19orf35Q6ZS72 473 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 MDP1Q86V88 176 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 STPG2Q8N412 459 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 ASCL3Q9NQ33 180 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 NAT8BQ9UHF3 227 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 KIAA1551Q9HCM1 1747 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 TRBV23-1A0A0A0MS06 115 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 TTRP02766 147 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 ARG1P05089 322 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 CD81P60033 236 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 LSM11P83369 360 aaKnown RBP eCLIP12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 TIAL1Q01085 375 aaKnown RBP eCLIP12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 ATP6V1FQ16864 119 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 FBXW9Q5XUX1 488 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 ZNF600Q6ZNG1 722 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 WFDC3Q8IUB2 231 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 MUC20Q8N307 709 aaPredicted RBP12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 SPICQ8N5J4 248 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 TCTEX1D1Q8N7M0 179 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 RNF2Q99496 336 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 ZNF831Q5JPB2 1677 aa12.3□□□□□ -0.44
RAPGEF3-205ENST00000449771 APELAP0DMC3 54 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 UBE2L3P68036 154 aaKnown RBP12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 TMEM97Q5BJF2 176 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 TMEM38BQ9NVV0 291 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 STRCQ7RTU9 1775 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 PRRC2BQ5JSZ5 2229 aaKnown RBP12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 SCN9AQ15858 1988 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 FGF8P55075 233 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 C9orf40Q8IXQ3 194 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 RHOVQ96L33 236 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 DCAF16Q9NXF7 216 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 CES1P1Q9UKY3 287 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 A0A1B0GV90 55 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 TMEM210A6NLX4 147 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 DGAT2L7PQ6IED9 249 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 ARL6IP6Q8N6S5 226 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 PRSS3P2Q8NHM4 247 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 SLC52A3Q9NQ40 469 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 GPR6P46095 362 aaPredicted RBP12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 Q6ZN92 141 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 OR10AC1Q8NH08 325 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 PHYHIPLQ96FC7 376 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 OR51M1Q9H341 326 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 RPL30P62888 115 aaKnown RBP12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 SLC23A3Q6PIS1 610 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 OR2C3Q8N628 320 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 FLYWCH2Q96CP2 140 aaKnown RBP12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 C10orf35Q96D05 121 aa12.29□□□□□ -0.44
RAPGEF3-205ENST00000449771 A0A1W2PQF6 199 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 MED19A0JLT2 244 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 NTN1O95631 604 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 TMEM241Q24JQ0 296 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 TMEM37Q8WXS4 190 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 IGHV4-34P06331 123 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 ZNF362Q5T0B9 420 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 MRM1Q6IN84 353 aaKnown RBP12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 DUSP18Q8NEJ0 188 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 MSL2Q9HCI7 577 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 SLC25A10Q9UBX3 287 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 ARID1BQ8NFD5 2236 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 GZMHP20718 246 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 DYNLT3P51808 116 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 NHLH1Q02575 133 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 NHLH2Q02577 135 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 CLEC2AQ6UVW9 174 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 TEX50A0A1B0GTY4 177 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 B4E171 279 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 TSPAN7P41732 249 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 Q8WTZ3 238 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 OPN3Q9H1Y3 402 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 SLC7A10Q9NS82 523 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 RABAC1Q9UI14 185 aa12.28□□□□□ -0.44
RAPGEF3-205ENST00000449771 HMGA2P52926 109 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms