RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CD40LGP29965 261 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 MRPS10P82664 201 aaKnown RBP12.19□□□□□ -0.46
TNF-208ENST00000449264 TRIQKQ629K1 86 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 FGFRL1Q8N441 504 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 SPICQ8N5J4 248 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 PPP1R35Q8TAP8 253 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 SETD6Q8TBK2 473 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 SNX22Q96L94 193 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 LURAP1Q96LR2 239 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 PIMREGQ9BSJ6 248 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 SHARPINQ9H0F6 387 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 DNTTIP1Q9H147 329 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 SEBOXQ9HB31 216 aaPredicted RBP12.19□□□□□ -0.46
TNF-208ENST00000449264 C12orf4Q9NQ89 552 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 ABCB10Q9NRK6 738 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 CTSZQ9UBR2 303 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 PCDHB10Q9UN67 800 aa12.19□□□□□ -0.46
TNF-208ENST00000449264 CCDC168Q8NDH2 2452 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 K7N7A8 449 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 NDUFA2O43678 99 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 TK1P04183 234 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 GLAP06280 429 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 CSF3P09919 207 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 NDUFB7P17568 137 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 AESQ08117 197 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 BAK1Q16611 211 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 ATPAF1Q5TC12 328 aaPredicted RBP12.18□□□□□ -0.46
TNF-208ENST00000449264 TPRX1Q8N7U7 411 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 GPX8Q8TED1 209 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 MAFIPQ8WZ33 124 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 MED30Q96HR3 178 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 THAP7Q9BT49 309 aaPredicted RBP12.18□□□□□ -0.46
TNF-208ENST00000449264 CCDC32Q9BV29 185 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 SCPEP1Q9HB40 452 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 IFT46Q9NQC8 304 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 SLC25A10Q9UBX3 287 aaPredicted RBP12.18□□□□□ -0.46
TNF-208ENST00000449264 KLK11Q9UBX7 282 aa12.18□□□□□ -0.46
TNF-208ENST00000449264 ZNF230Q9UIE0 474 aaPredicted RBP12.18□□□□□ -0.46
TNF-208ENST00000449264 DSCAML1Q8TD84 2053 aa12.17□□□□□ -0.46
TNF-208ENST00000449264 MEX3AA1L020 520 aaKnown RBP12.17□□□□□ -0.46
TNF-208ENST00000449264 TNFRSF13BO14836 293 aaPredicted RBP12.17□□□□□ -0.46
TNF-208ENST00000449264 NDUFB3O43676 98 aa12.17□□□□□ -0.46
TNF-208ENST00000449264 GSTZ1O43708 216 aaPredicted RBP12.17□□□□□ -0.46
TNF-208ENST00000449264 LANCL1O43813 399 aa12.17□□□□□ -0.46
TNF-208ENST00000449264 FSTL3O95633 263 aa12.17□□□□□ -0.46
TNF-208ENST00000449264 GIFP27352 417 aa12.17□□□□□ -0.46
TNF-208ENST00000449264 EDDM3BP56851 147 aa12.17□□□□□ -0.46
TNF-208ENST00000449264 TMEM155Q4W5P6 130 aa12.17□□□□□ -0.46
TNF-208ENST00000449264 KRBOX4Q5JUW0 171 aa12.17□□□□□ -0.46
TNF-208ENST00000449264 GDPD3Q7L5L3 318 aa12.17□□□□□ -0.46
TNF-208ENST00000449264 GVQW1Q8N7I0 195 aa12.17□□□□□ -0.46
TNF-208ENST00000449264 OR4K15Q8NH41 348 aa12.17□□□□□ -0.46
TNF-208ENST00000449264 CCDC107Q8WV48 283 aa12.17□□□□□ -0.46
TNF-208ENST00000449264 COQ2Q96H96 371 aa12.17□□□□□ -0.46
TNF-208ENST00000449264 TMEM30CPA0ZSE6 113 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 SULT1C2O00338 296 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 DVL1O14640 695 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 MGST3O14880 152 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 CA11O75493 328 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 CSN2P05814 226 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 FCGR3AP08637 254 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 IL7P13232 177 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 GDNFP39905 211 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 KCNJ3P48549 501 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 INPP1P49441 399 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 LRRC10Q5BKY1 277 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 RSBN1Q5VWQ0 802 aaPredicted RBP12.16□□□□□ -0.46
TNF-208ENST00000449264 SHEQ5VZ18 495 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 C16orf87Q6PH81 154 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 ZNF497Q6ZNH5 498 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 NLRC3Q7RTR2 1065 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 OR8B3Q8NGG8 313 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 MRPL30Q8TCC3 161 aaKnown RBP12.16□□□□□ -0.46
TNF-208ENST00000449264 C10orf105Q8TEF2 133 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 BORCS5Q969J3 196 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 TRIM63Q969Q1 353 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 OR8B2Q96RD0 313 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 ST6GALNAC5Q9BVH7 336 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 FAM234AQ9H0X4 552 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 BAHCC1Q9P281 2608 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 KAAG1Q9UBP8 84 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 KIF25Q9UIL4 384 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 IGHV4-30-2A0A087WSY4 118 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 MEIKINA0A087WXM9 373 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 TRAV39A0A0B4J263 110 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 LINC00854A0A1B0GVQ3 168 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 A0A1W2PQ09 198 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 FCN3O75636 299 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 RBBP9O75884 186 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 NAPSAO96009 420 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 GLIPR1P48060 266 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 ACTBP60709 375 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 ACTG1P63261 375 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 CLEC12BQ2HXU8 276 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 Q6ZPA2 131 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 OR5D13Q8NGL4 314 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 H1FXQ92522 213 aaKnown RBP12.16□□□□□ -0.46
TNF-208ENST00000449264 NINJ1Q92982 152 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 MTFP1Q9UDX5 166 aa12.16□□□□□ -0.46
TNF-208ENST00000449264 MIOXQ9UGB7 285 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms