RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 SCRT1Q9BWW7 348 aa14.5□□□□□ -0.09
TOM1-210ENST00000449058 PARP12Q9H0J9 701 aaKnown RBP14.5□□□□□ -0.09
TOM1-210ENST00000449058 OPA3Q9H6K4 179 aa14.5□□□□□ -0.09
TOM1-210ENST00000449058 ZNF552Q9H707 407 aaPredicted RBP14.5□□□□□ -0.09
TOM1-210ENST00000449058 NFYBP25208 207 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 ITGA3P26006 1051 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 SNCAP37840 140 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 KIR2DS1A0A191URI9 304 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 LNP1A1A4G5 178 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 SLC22A20A6NK97 555 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 CD300LBA8K4G0 201 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 SYNGR1O43759 233 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 TSPAN15O95858 294 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 LMO1P25800 156 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 KIR2DS4P43632 304 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 GNMTQ14749 295 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 KIR2DS1Q14954 304 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 RNPS1Q15287 305 aaKnown RBP14.49□□□□□ -0.09
TOM1-210ENST00000449058 MIDNQ504T8 468 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 ZNF818PQ6ZRF7 136 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 LINC00696Q6ZRV3 163 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 NUFIP2Q7Z417 695 aaKnown RBP14.49□□□□□ -0.09
TOM1-210ENST00000449058 SELENOHQ8IZQ5 122 aaKnown RBP14.49□□□□□ -0.09
TOM1-210ENST00000449058 OR10Z1Q8NGY1 313 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 SECTM1Q8WVN6 248 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 OR5P3Q8WZ94 311 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 GTF3AQ92664 365 aaKnown RBP14.49□□□□□ -0.09
TOM1-210ENST00000449058 LUZP4Q9P127 313 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 CACFD1Q9UGQ2 172 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 LHX6Q9UPM6 363 aa14.49□□□□□ -0.09
TOM1-210ENST00000449058 UBE2J1Q9Y385 318 aaPredicted RBP14.49□□□□□ -0.09
TOM1-210ENST00000449058 IGKV1D-13A0A0B4J2D9 117 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 IGKV1-6A0A0C4DH72 117 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 IGKV1-13P0DP09 117 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 RAB5CP51148 216 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 EWSR1Q01844 656 aaKnown RBP eCLIP14.48□□□□□ -0.09
TOM1-210ENST00000449058 TSC22D1Q15714 1073 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 TMEM164Q5U3C3 297 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 ZNF565Q8N9K5 539 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 ATP23Q9Y6H3 246 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 CTXN2P0C2S0 81 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 CTAG1AP78358 180 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 PLGLB1Q02325 96 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 LINC00596Q86U02 117 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 ZNF695Q8IW36 515 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 GAPTQ8N292 157 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 LILRB1Q8NHL6 650 aaPredicted RBP14.48□□□□□ -0.09
TOM1-210ENST00000449058 ABHD14BQ96IU4 210 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 SPIN2AQ99865 258 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 SPIN2BQ9BPZ2 258 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 SH3BGRL3Q9H299 93 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 PLK3Q9H4B4 646 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 MLXQ9UH92 298 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 STRAPQ9Y3F4 350 aaKnown RBP14.48□□□□□ -0.09
TOM1-210ENST00000449058 KLF2Q9Y5W3 355 aaPredicted RBP14.48□□□□□ -0.09
TOM1-210ENST00000449058 KPTNQ9Y664 436 aa14.48□□□□□ -0.09
TOM1-210ENST00000449058 ZNF407Q9C0G0 2248 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 DUXBA0A1W2PPF3 345 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 CLEC18AA5D8T8 446 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 NME2P1O60361 137 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 PLP2Q04941 152 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 SPIN3Q5JUX0 258 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 OR2C3Q8N628 320 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 CLEC18CQ8NCF0 446 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 HIST1H2AAQ96QV6 131 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 RIMS4Q9H426 269 aaPredicted RBP14.47□□□□□ -0.09
TOM1-210ENST00000449058 TRBV6-6A0A0A6YYG2 114 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 CD59P13987 128 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 UCP1P25874 307 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 WNT5AP41221 380 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 NKX2-1P43699 371 aaPredicted RBP14.47□□□□□ -0.09
TOM1-210ENST00000449058 HMGN3Q15651 99 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 C3AR1Q16581 482 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 AKR1E2Q96JD6 320 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 SPACA1Q9HBV2 294 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 C19orf12Q9NSK7 152 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 MPC1Q9Y5U8 109 aa14.47□□□□□ -0.09
TOM1-210ENST00000449058 HSPB6O14558 160 aa14.46□□□□□ -0.09
TOM1-210ENST00000449058 SP1P08047 785 aa14.46□□□□□ -0.09
TOM1-210ENST00000449058 PRKACAP17612 351 aa14.46□□□□□ -0.09
TOM1-210ENST00000449058 CAMLGP49069 296 aa14.46□□□□□ -0.09
TOM1-210ENST00000449058 FHITP49789 147 aa14.46□□□□□ -0.09
TOM1-210ENST00000449058 MEOX1P50221 254 aa14.46□□□□□ -0.09
TOM1-210ENST00000449058 ZNF616Q08AN1 781 aa14.46□□□□□ -0.09
TOM1-210ENST00000449058 NMSQ5H8A3 153 aa14.46□□□□□ -0.09
TOM1-210ENST00000449058 SUMF2Q8NBJ7 301 aa14.46□□□□□ -0.09
TOM1-210ENST00000449058 HSD17B11Q8NBQ5 300 aa14.46□□□□□ -0.09
TOM1-210ENST00000449058 MDS2Q8NDY4 140 aa14.46□□□□□ -0.09
TOM1-210ENST00000449058 MRPL30Q8TCC3 161 aaKnown RBP14.46□□□□□ -0.09
TOM1-210ENST00000449058 NEK7Q8TDX7 302 aa14.46□□□□□ -0.09
TOM1-210ENST00000449058 IGSF23A1L1A6 192 aa14.46□□□□□ -0.1
TOM1-210ENST00000449058 FAM24AA6NFZ4 105 aa14.46□□□□□ -0.1
TOM1-210ENST00000449058 OR5B21A6NL26 309 aa14.46□□□□□ -0.1
TOM1-210ENST00000449058 LILRA1O75019 489 aa14.46□□□□□ -0.1
TOM1-210ENST00000449058 POLR2GP62487 172 aaKnown RBP eCLIP14.46□□□□□ -0.1
TOM1-210ENST00000449058 PEA15Q15121 130 aa14.46□□□□□ -0.1
TOM1-210ENST00000449058 PCSK4Q6UW60 755 aa14.46□□□□□ -0.1
TOM1-210ENST00000449058 MCEMP1Q8IX19 187 aa14.46□□□□□ -0.1
TOM1-210ENST00000449058 CCL28Q9NRJ3 127 aa14.46□□□□□ -0.1
TOM1-210ENST00000449058 PRSS50Q9UI38 385 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms