RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 VDAC3Q9Y277 283 aa6.6□□□□□ -1.35
TRIM4-204ENST00000447480 COA3Q9Y2R0 106 aaPredicted RBP6.6□□□□□ -1.35
TRIM4-204ENST00000447480 NCOR2Q9Y618 2525 aa6.6□□□□□ -1.35
TRIM4-204ENST00000447480 LOC100509620A0A075B734 347 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 TRBV11-1A0A0K0K1C0 115 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 A0A1W2PPE2 198 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 OR2W5A6NFC9 320 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 NPIPA5E9PKD4 350 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 MASP2O00187 686 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 P2RY10O00398 339 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 GEMIN2O14893 280 aaKnown RBP6.59□□□□□ -1.35
TRIM4-204ENST00000447480 TCAPO15273 167 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 SOX15O60248 233 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 TSPAN2O60636 221 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 YIF1AO95070 293 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 SCAF4O95104 1147 aaKnown RBP6.59□□□□□ -1.35
TRIM4-204ENST00000447480 MPIG6BO95866 241 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 IFNA1P01562 189 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 ARG1P05089 322 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 WNT2P09544 360 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 SELLP14151 372 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 IL12BP29460 328 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 CYB561P49447 251 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 TNFSF10P50591 281 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 SSR4P51571 173 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 CCR4P51679 360 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 SLC37A1P57057 533 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 NUTF2P61970 127 aaKnown RBP6.59□□□□□ -1.35
TRIM4-204ENST00000447480 LSM6P62312 80 aaKnown RBP6.59□□□□□ -1.35
TRIM4-204ENST00000447480 RNF4P78317 190 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 SERF2P84101 59 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 IL24Q13007 206 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 SLC10A1Q14973 349 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 TGIF1Q15583 401 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 ODF4Q2M2E3 257 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 MPV17LQ2QL34 196 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 ACOT6Q3I5F7 207 aaPredicted RBP6.59□□□□□ -1.35
TRIM4-204ENST00000447480 PLAC9Q5JTB6 97 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 C9orf152Q5JTZ5 239 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 NCMAPQ5T1S8 102 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 OR2T2Q6IF00 324 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 OR2A2Q6IF42 318 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 DGAT2L6Q6ZPD8 337 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 SHISA6Q6ZSJ9 500 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 DPPA2Q7Z7J5 298 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 VASH2Q86V25 355 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 RPS19BP1Q86WX3 136 aaKnown RBP6.59□□□□□ -1.35
TRIM4-204ENST00000447480 FAM219AQ8IW50 185 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 OR5AS1Q8N127 324 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 ZADH2Q8N4Q0 377 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 OR2C3Q8N628 320 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 SEMA6DQ8NFY4 1073 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 OR51T1Q8NGJ9 327 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 OR2AJ1Q8NGZ0 328 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 GPR119Q8TDV5 335 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 PTPMT1Q8WUK0 201 aaPredicted RBP6.59□□□□□ -1.35
TRIM4-204ENST00000447480 MBD3L1Q8WWY6 194 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 TSLPQ969D9 159 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 MRPL24Q96A35 216 aaKnown RBP6.59□□□□□ -1.35
TRIM4-204ENST00000447480 ADIPOR1Q96A54 375 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 ISOC2Q96AB3 205 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 SPSB1Q96BD6 273 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 SLAMF6Q96DU3 332 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 THOC3Q96J01 351 aaKnown RBP6.59□□□□□ -1.35
TRIM4-204ENST00000447480 IMMP1LQ96LU5 166 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 PACRGQ96M98 296 aaPredicted RBP6.59□□□□□ -1.35
TRIM4-204ENST00000447480 CDH20Q9HBT6 801 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 CISD1Q9NZ45 108 aaKnown RBP6.59□□□□□ -1.35
TRIM4-204ENST00000447480 LRFN1Q9P244 771 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 IL17BQ9UHF5 180 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 ANXA10Q9UJ72 324 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 NPIPA1Q9UND3 350 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 RAXQ9Y2V3 346 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 FBXO7Q9Y3I1 522 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 PUS1Q9Y606 427 aaKnown RBP eCLIP6.59□□□□□ -1.35
TRIM4-204ENST00000447480 WSB1Q9Y6I7 421 aa6.59□□□□□ -1.35
TRIM4-204ENST00000447480 ACACBO00763 2458 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 TPRP12270 2363 aaKnown RBP6.58□□□□□ -1.36
TRIM4-204ENST00000447480 A0A087WZY1 265 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 A0A1B0GU03 582 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 TMEM238LA0A1B0GVL6 79 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 LRP5LA4QPB2 252 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 FAM90A10PA6NDY2 464 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 FAM90A18PA6NE21 464 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 FAM90A16PA6NEW6 464 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 FAM90A20PA6NIJ5 464 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 FAM90A8PA6NJQ4 464 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 FAM90A7PA6NKC0 464 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 ZNF726A6NNF4 738 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 FAM90A22PA8MWA6 464 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 FAM90A12PA8MX19 464 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 FAM90A5PA8MXJ8 464 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 FAM90A23PA8MXZ1 464 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 SOCS1O15524 211 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 IGLV3-1P01715 115 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 CLPSP04118 112 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 IGKV3-11P04433 115 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 FAM90A15PP0C7V4 464 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 FAM90A13PP0C7W8 464 aa6.58□□□□□ -1.36
TRIM4-204ENST00000447480 FAM90A14PP0C7W9 464 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms