RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SSBP3Q9BWW4 388 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC4-203ENST00000447216 FAM234AQ9H0X4 552 aa14.91□□□□□ -0.02
TRAPPC4-203ENST00000447216 LPAR2Q9HBW0 351 aa14.91□□□□□ -0.02
TRAPPC4-203ENST00000447216 ELF5Q9UKW6 265 aaPredicted RBP14.91□□□□□ -0.02
TRAPPC4-203ENST00000447216 MEX3AA1L020 520 aaKnown RBP14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 KIAA1324LA8MWY0 1029 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 MGST3O14880 152 aa14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 HEXAP06865 529 aa14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 EDDM3BP56851 147 aa14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 AESQ08117 197 aa14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 GDPD3Q7L5L3 318 aa14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 OR5D13Q8NGL4 314 aa14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 CMTM3Q96MX0 182 aa14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 DIABLOQ9NR28 239 aa14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 ETAA1Q9NY74 926 aa14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 EXTL2Q9UBQ6 330 aa14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 KCNK7Q9Y2U2 307 aa14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 A3GALT2U3KPV4 340 aa14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 OTOGQ6ZRI0 2925 aa14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 ACANP16112 2415 aa14.9□□□□□ -0.02
TRAPPC4-203ENST00000447216 ZANQ9Y493 2812 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 C22orf46C9J442 243 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 MFNGO00587 321 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 SCGNO76038 276 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 PTHLHP12272 177 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 HIST1H1DP16402 221 aaKnown RBP14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 GLIPR1P48060 266 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 NPY4RP50391 375 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 CDNFQ49AH0 187 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 KRBOX4Q5JUW0 171 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 CNIH2Q6PI25 160 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 BTN2A1Q7KYR7 527 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 HDHD3Q9BSH5 251 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 DCTN5Q9BTE1 182 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 C19orf12Q9NSK7 152 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 AK3Q9UIJ7 227 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 HSF4Q9ULV5 492 aa14.89□□□□□ -0.03
TRAPPC4-203ENST00000447216 TRAV39A0A0B4J263 110 aa14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 TMEM235A6NFC5 223 aa14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 H3BUI4 141 aa14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 XRCC3O43542 346 aa14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 CLPXO76031 633 aa14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 GLAP06280 429 aa14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 TNFSF8P32971 234 aa14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 TAS2R20P59543 309 aa14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 RBM39Q14498 530 aaKnown RBP14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 ZNF260Q3ZCT1 412 aa14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 TMEM69Q5SWH9 247 aa14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 RSBN1Q5VWQ0 802 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 DIRAS2Q96HU8 199 aa14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 PTTG2Q9NZH5 202 aa14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 KIF25Q9UIL4 384 aa14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 ADAM30Q9UKF2 790 aa14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 MRPS7Q9Y2R9 242 aaKnown RBP14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 ZNF469Q96JG9 3925 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC4-203ENST00000447216 LOC105371242A0A075B767 164 aa14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 A0A0A6YYH2 397 aa14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 A6NJ64 397 aa14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 A8MXK9 166 aa14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 CSN2P05814 226 aa14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 IGHV4-31P0DP07 118 aa14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 KCNJ3P48549 501 aa14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 P2RX3P56373 397 aa14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 TMEM249Q2WGJ8 235 aa14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 ZNF497Q6ZNH5 498 aa14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 FAM185AQ8N0U4 392 aa14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 OR6Q1Q8NGQ2 317 aa14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 CCDC107Q8WV48 283 aa14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 GCDHQ92947 438 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 NUDT16L1Q9BRJ7 211 aaKnown RBP14.87□□□□□ -0.03
TRAPPC4-203ENST00000447216 MEIKINA0A087WXM9 373 aa14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 TMEM30CPA0ZSE6 113 aa14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 ODAMA1E959 279 aa14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 FOXH1O75593 365 aa14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 MT-ND4P03905 459 aa14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 S100A5P33763 92 aa14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 RPL31P62899 125 aaKnown RBP14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 ARFRP1Q13795 201 aa14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 SLC35E4Q6ICL7 350 aa14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 OR4K15Q8NH41 348 aa14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 NUDCD2Q8WVJ2 157 aa14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 C1orf159Q96HA4 380 aa14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 WDFY2Q96P53 400 aa14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 AUNIPQ9H7T9 357 aa14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 MMP26Q9NRE1 261 aa14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 RPUSD1Q9UJJ7 312 aaKnown RBP14.86□□□□□ -0.03
TRAPPC4-203ENST00000447216 CELSR1Q9NYQ6 3014 aa14.85□□□□□ -0.03
TRAPPC4-203ENST00000447216 CSPG4Q6UVK1 2322 aa14.85□□□□□ -0.03
TRAPPC4-203ENST00000447216 A0A1W2PQ09 198 aa14.85□□□□□ -0.03
TRAPPC4-203ENST00000447216 GSTP1P09211 210 aaKnown RBP14.85□□□□□ -0.03
TRAPPC4-203ENST00000447216 CD3GP09693 182 aa14.85□□□□□ -0.03
TRAPPC4-203ENST00000447216 ERP29P30040 261 aaKnown RBP14.85□□□□□ -0.03
TRAPPC4-203ENST00000447216 TALDO1P37837 337 aa14.85□□□□□ -0.03
TRAPPC4-203ENST00000447216 ZNF273Q14593 569 aa14.85□□□□□ -0.03
TRAPPC4-203ENST00000447216 TCF23Q7RTU1 214 aa14.85□□□□□ -0.03
TRAPPC4-203ENST00000447216 SNX29P2Q8IUI4 249 aa14.85□□□□□ -0.03
TRAPPC4-203ENST00000447216 LINC01356Q8N9X3 169 aa14.85□□□□□ -0.03
TRAPPC4-203ENST00000447216 MRPL30Q8TCC3 161 aaKnown RBP14.85□□□□□ -0.03
TRAPPC4-203ENST00000447216 MSI2Q96DH6 328 aaKnown RBP14.85□□□□□ -0.03
TRAPPC4-203ENST00000447216 COX4I2Q96KJ9 171 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms