RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 EIF4E3Q8N5X7 224 aaKnown RBP7.5□□□□□ -1.21
PTPN3-204ENST00000446349 OR4D10Q8NGI6 311 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 EID2BQ96D98 161 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 LEUTXA8MZ59 168 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 OIP5O43482 229 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 CTAG2O75638 210 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 RSPO4Q2I0M5 234 aaPredicted RBP7.5□□□□□ -1.21
PTPN3-204ENST00000446349 C11orf87Q6NUJ2 197 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 LCN15Q6UWW0 184 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 GAB2Q9UQC2 676 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 A0A1B0GU03 582 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 FOXS1O43638 330 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 DHRS7BQ6IAN0 325 aaPredicted RBP7.5□□□□□ -1.21
PTPN3-204ENST00000446349 LILRB4Q8NHJ6 448 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 MRPS18CQ9Y3D5 142 aaKnown RBP7.5□□□□□ -1.21
PTPN3-204ENST00000446349 TSPAN2O60636 221 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 UCP2P55851 309 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 OXA1LQ15070 435 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 DGAT2L7PQ6IED9 249 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 GLDNQ6ZMI3 551 aaPredicted RBP7.5□□□□□ -1.21
PTPN3-204ENST00000446349 MDP1Q86V88 176 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 ABHD3Q8WU67 409 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 ZNF629Q9UEG4 869 aaPredicted RBP7.5□□□□□ -1.21
PTPN3-204ENST00000446349 IGHV3-64DA0A0J9YX35 117 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 OR2W5A6NFC9 320 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 RFPL4AA6NLU0 287 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 RFPL4AL1F8VTS6 287 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 IGHA1P01876 353 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 SELENOPP49908 381 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 FAM74A3Q4VXF1 159 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 FAAP24Q9BTP7 215 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 CABLES2Q9BTV7 478 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 ELOVL1Q9BW60 279 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 TET1Q8NFU7 2136 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 TRAV30A0A087WSZ9 112 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 J3QR89 54 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 ATXN7O15265 892 aaPredicted RBP7.5□□□□□ -1.21
PTPN3-204ENST00000446349 GFRA1P56159 465 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 PDZK1IP1Q13113 114 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 EIF4EBP2Q13542 120 aaPredicted RBP7.5□□□□□ -1.21
PTPN3-204ENST00000446349 CBLN3Q6UW01 205 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 ZFP62Q8NB50 900 aaPredicted RBP7.5□□□□□ -1.21
PTPN3-204ENST00000446349 HARBI1Q96MB7 349 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 MOGAT1Q96PD6 335 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 ANXA10Q9UJ72 324 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 LCTP09848 1927 aa7.5□□□□□ -1.21
PTPN3-204ENST00000446349 TOR2AQ5JU69 321 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 SNX22Q96L94 193 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 PKIBQ9C010 78 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 C20orf141Q9NUB4 165 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 CISD1Q9NZ45 108 aaKnown RBP7.49□□□□□ -1.21
PTPN3-204ENST00000446349 DOCK6Q96HP0 2047 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 SYNGR1O43759 233 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 SYNGR3O43761 229 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 ARG1P05089 322 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 PPP1CCP36873 323 aaKnown RBP7.49□□□□□ -1.21
PTPN3-204ENST00000446349 GNG4P50150 75 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 KHDC3LQ587J8 217 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 PCSK4Q6UW60 755 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 FBXL17Q9UF56 701 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 GGTLC2Q14390 218 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 NAA50Q9GZZ1 169 aaKnown RBP7.49□□□□□ -1.21
PTPN3-204ENST00000446349 WIPI2Q9Y4P8 454 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 TRBV23-1A0A0A0MS06 115 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 TMEM8BA6NDV4 472 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 OR2A4O95047 310 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 SELENOTP62341 195 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 CEACAM21Q3KPI0 293 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 OR13C5Q8NGS8 318 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 SAT2Q96F10 170 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-204ENST00000446349 OR2A7Q96R45 310 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 CNTD2Q9H8S5 307 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 FSCN3Q9NQT6 498 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 SLC7A10Q9NS82 523 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 ING1Q9UK53 422 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-204ENST00000446349 OR2W1Q9Y3N9 320 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 A0A0A6YYJ9 748 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 FCARP24071 287 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 SNRPNP63162 240 aaKnown RBP7.49□□□□□ -1.21
PTPN3-204ENST00000446349 TEX30Q5JUR7 227 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 SLC25A45Q8N413 288 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 Q9N2K0 584 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 CDS2O95674 445 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 LIPFP07098 398 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 UNQ9370/PRO34162Q6UXP9 181 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 SLC22A18ASQ8N1D0 253 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 SPTA1P02549 2419 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 MMP9P14780 707 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 DPPA3Q6W0C5 159 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 TMEM18Q96B42 140 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 CACNG5Q9UF02 275 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 PILRAQ9UKJ1 303 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 MMP24Q9Y5R2 645 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 V9GYS6 101 aa7.49□□□□□ -1.21
PTPN3-204ENST00000446349 HEATR5BQ9P2D3 2071 aa7.48□□□□□ -1.21
PTPN3-204ENST00000446349 RPL36A-HNRNPH2H7BZ11 118 aa7.48□□□□□ -1.21
PTPN3-204ENST00000446349 PRKNO60260 465 aaPredicted RBP7.48□□□□□ -1.21
PTPN3-204ENST00000446349 DXOO77932 396 aaKnown RBP7.48□□□□□ -1.21
PTPN3-204ENST00000446349 HLA-GP17693 338 aa7.48□□□□□ -1.21
PTPN3-204ENST00000446349 AMER3Q8N944 861 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms