RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	DEDD	O75618	318 aa		10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	CCL3	P10147	92 aa		10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	HERV-K104	P61576	105 aa		10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	ZXDA	P98168	799 aa		10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	VAX1	Q5SQQ9	334 aa		10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	SLC25A26	Q70HW3	274 aa		10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	RNASE8	Q8TDE3	154 aa	Known RBP	10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	ZNF501	Q96CX3	271 aa	Predicted RBP	10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	MRPL13	Q9BYD1	178 aa	Known RBP	10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	PNRC2	Q9NPJ4	139 aa	Known RBP	10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	MYOT	Q9UBF9	498 aa		10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	HSPB2	A8KAH6	182 aa		10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	ZNF154	Q13106	437 aa		10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	HSPB2	Q16082	182 aa		10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	KPTN	Q9Y664	436 aa		10.88	□□□□□ -0.67
DDR1-238	ENST00000446312	ZNF724	A8MTY0	619 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	PIAS2	O75928	621 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	SCGN	O76038	276 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	JTB	O76095	146 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	CD5	P06127	495 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	SNCA	P37840	140 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	UBE2K	P61086	200 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	RSPO1	Q2MKA7	263 aa	Predicted RBP	10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	PLCXD3	Q63HM9	321 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	SCGB3A2	Q96PL1	93 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	RASL10B	Q96S79	203 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	PARD6A	Q9NPB6	346 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	OCIAD1	Q9NX40	245 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	PLA2G3	Q9NZ20	509 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	IGKV1-12	A0A0C4DH73	117 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	CYB5B	O43169	146 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	IGKV1D-12	P01611	117 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	IAPP	P10997	89 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	SRSF4	Q08170	494 aa	Known RBP	10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	CYB561D1	Q8N8Q1	229 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	OR1K1	Q8NGR3	316 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	ST8SIA1	Q92185	356 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	FAHD2A	Q96GK7	314 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	LUZP4	Q9P127	313 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	GNG13	Q9P2W3	67 aa		10.87	□□□□□ -0.67
DDR1-238	ENST00000446312	TRBV6-7	A0A0A0MS04	114 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312		A0A1W2PQD3	144 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	HS3ST1	O14792	307 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	DEFA4	P12838	97 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	LPAL2	Q16609	132 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	ZNF880	Q6PDB4	577 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	SSX7	Q7RTT5	188 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	OR5C1	Q8NGR4	320 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	LAMA5	O15230	3695 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	NSG1	A0A0A6YYJ2	146 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312		A0A0G2JMM0	328 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312		A0A1W2PPB8	328 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312		A0A1W2PRS3	328 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	KIR3DP1	A8MWS1	328 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	ADAM20	O43506	726 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	TLX3	O43711	291 aa	Predicted RBP	10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	SCAF4	O95104	1147 aa	Known RBP	10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	CXCL1	P09341	107 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	MSR1	P21757	451 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	CD27	P26842	260 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	ATP6V0C	P27449	155 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	NTF4	P34130	210 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	OR3A1	P47881	315 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	VAMP2	P63027	116 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	SLC35A1	P78382	337 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	NAAA	Q02083	359 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	MPV17L	Q2QL34	196 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	CRIP3	Q6Q6R5	217 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	S100A7A	Q86SG5	101 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	LHFPL1	Q86WI0	220 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	RDH5	Q92781	318 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	MVB12A	Q96EY5	273 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	MRGPRX4	Q96LA9	322 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	DKKL1	Q9UK85	242 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	NBAS	A2RRP1	2371 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	LILRA5	A6NI73	299 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	FIGNL2	A6NMB9	653 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312		A8MXE2	369 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	ELL	P55199	621 aa	Predicted RBP	10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	RAB11A	P62491	216 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	SLC25A47	Q6Q0C1	308 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	CALHM1	Q8IU99	346 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	PTX4	Q96A99	478 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	CALHM2	Q9HA72	323 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	CRIM1	Q9NZV1	1036 aa		10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	RBM7	Q9Y580	266 aa	Known RBP	10.86	□□□□□ -0.67
DDR1-238	ENST00000446312	ATM	Q13315	3056 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	ARFGEF3	Q5TH69	2177 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	NUDT19	A8MXV4	375 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	MKRN2OS	H3BPM6	223 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	DHRS3	O75911	302 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	NXPH2	O95156	264 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	CYB5R3	P00387	301 aa	Predicted RBP	10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	TRGC2	P03986	189 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	ZNF32	P17041	273 aa		10.85	□□□□□ -0.67
DDR1-238	ENST00000446312	TDGF1P3	P51864	188 aa		10.85	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms