RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 MRPL3P09001 348 aaKnown RBP2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 ZNF7P17097 686 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 CELP19835 753 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 AZU1P20160 251 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 PRSS3P35030 304 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 ACOT2P49753 483 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 NKX2-5P52952 324 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 CEBPGP53567 150 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 RPL10AP62906 217 aaKnown RBP2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 BASP1P80723 227 aaKnown RBP2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 MGAT3Q09327 533 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 ADIGQ0VDE8 80 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 MLLT11Q13015 90 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 SNRNP35Q16560 246 aaKnown RBP2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 CCL15Q16663 113 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 IMPG1Q17R60 797 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 KCTD16Q68DU8 428 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 ZNF530Q6P9A1 599 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 Q8N9W7 124 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 STOML3Q8TAV4 291 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 C15orf40Q8WUR7 153 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 MRPL48Q96GC5 212 aaKnown RBP2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 KCTD7Q96MP8 289 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 SPACA5Q96QH8 159 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 SUCNR1Q9BXA5 334 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 DERL2Q9GZP9 239 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 ARL6Q9H0F7 186 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 TPK1Q9H3S4 243 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 BABAM2Q9NXR7 383 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 C3orf18Q9UK00 162 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 CELA1Q9UNI1 258 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 PSG11Q9UQ72 335 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 CICQ96RK0 1608 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 BRCA2P51587 3418 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 CEP290O15078 2479 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 SPTBN5Q9NRC6 3674 aaKnown RBP2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 RAB3GAP2Q9H2M9 1393 aa2.99□□□□□ -1.93
HMGB1P48-201ENST00000446155 IGKV6D-21A0A0A0MT36 114 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 IGHV1OR15-9A0A0B4J2B8 117 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 IGHV3-64DA0A0J9YX35 117 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 IGHV5-10-1A0A0J9YXX1 117 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 TINCRA0A1B0GVN0 87 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 NKX2-6A6NCS4 301 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 F5H5T6 163 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 GOLGA6L19H0YKK7 550 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 SSNA1O43805 119 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 IGLV1-47P01700 117 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 C8orf88P0DMB2 117 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 NQO1P15559 274 aaKnown RBP2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 KRTAP12-2P59991 146 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 RAP1AP62834 184 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 GRB2P62993 217 aaKnown RBP2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 FAM3AP98173 230 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 STX5Q13190 355 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 C4orf26Q17RF5 130 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 MPV17L2Q567V2 206 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 CLEC12AQ5QGZ9 265 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 OGFRL1Q5TC84 451 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 DGAT2L6Q6ZPD8 337 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 ZNF429Q86V71 674 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 RIBC1Q8N443 379 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 LINC00337Q8N6G1 96 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 ZNF645Q8N7E2 425 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 BLOC1S5Q8TDH9 187 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 ESR2Q92731 530 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 PTH2Q96A98 100 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 EXOSC8Q96B26 276 aaKnown RBP2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 FMC1Q96HJ9 113 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 FAM210BQ96KR6 192 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 C18orf15Q96N68 181 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 OR2A5Q96R48 311 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 GGTLC1Q9BX51 225 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 UGT2B28Q9BY64 529 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 MRPL20Q9BYC9 149 aaKnown RBP2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 SLC17A9Q9BYT1 436 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 METTL9Q9H1A3 318 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 OR52D1Q9H346 318 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 RPP21Q9H633 154 aaKnown RBP2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 HRASLSQ9HDD0 168 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 FBXO6Q9NRD1 293 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 ABCA3Q99758 1704 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 KIF1AQ12756 1690 aa2.98□□□□□ -1.93
HMGB1P48-201ENST00000446155 NRCAMQ92823 1304 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 PARP4Q9UKK3 1724 aaKnown RBP2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 ANKRD50Q9ULJ7 1429 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 DAPL1A0PJW8 107 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 I3L4J1 428 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 UPK1AO00322 258 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 PFDN6O15212 129 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 TGOLN2O43493 480 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 GCM2O75603 506 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 RBBP9O75884 186 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 SOX14O95416 240 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 CD74P04233 296 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 IGHV1-8P0DP01 117 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 SLC2A1P11166 492 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 ZNF17P17021 662 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 ATF1P18846 271 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 M6PRP20645 277 aa2.97□□□□□ -1.93
HMGB1P48-201ENST00000446155 LHX2P50458 406 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms