RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 SPANXN2Q5MJ10 180 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 BAIAP2L2Q6UXY1 529 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 FGFRL1Q8N441 504 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 ASCC1Q8N9N2 400 aaKnown RBP12.54□□□□□ -0.4
CCNE1-203ENST00000444983 OR5D13Q8NGL4 314 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 CLDND2Q8NHS1 167 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 PLPPR1Q8TBJ4 325 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 DYRK2Q92630 601 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 COQ2Q96H96 371 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 AK3Q9UIJ7 227 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 MALRD1Q5VYJ5 2156 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 IGHV4-61A0A0C4DH41 118 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 UBE2QL1A1L167 161 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 DVL1O14640 695 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 MGST3O14880 152 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 RPS2P15880 293 aaKnown RBP12.54□□□□□ -0.4
CCNE1-203ENST00000444983 ERP29P30040 261 aaKnown RBP12.54□□□□□ -0.4
CCNE1-203ENST00000444983 SEC61A1P61619 476 aaKnown RBP12.54□□□□□ -0.4
CCNE1-203ENST00000444983 ZNF45Q02386 682 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 MADCAM1Q13477 382 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 GRK1Q15835 563 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 RSBN1Q5VWQ0 802 aaPredicted RBP12.54□□□□□ -0.4
CCNE1-203ENST00000444983 PYHIN1Q6K0P9 492 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 ZNF497Q6ZNH5 498 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 Q6ZPA2 131 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 NEIL1Q96FI4 390 aaPredicted RBP12.54□□□□□ -0.4
CCNE1-203ENST00000444983 NCOR1P1Q9H4R4 102 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 SLC25A10Q9UBX3 287 aaPredicted RBP12.54□□□□□ -0.4
CCNE1-203ENST00000444983 MRPS7Q9Y2R9 242 aaKnown RBP12.54□□□□□ -0.4
CCNE1-203ENST00000444983 ITPR3Q14573 2671 aa12.54□□□□□ -0.4
CCNE1-203ENST00000444983 MEIOCA2RUB1 952 aa12.53□□□□□ -0.4
CCNE1-203ENST00000444983 CTDSPLO15194 276 aa12.53□□□□□ -0.4
CCNE1-203ENST00000444983 NDUFB3O43676 98 aa12.53□□□□□ -0.4
CCNE1-203ENST00000444983 SSX5O60225 188 aa12.53□□□□□ -0.4
CCNE1-203ENST00000444983 AESQ08117 197 aa12.53□□□□□ -0.4
CCNE1-203ENST00000444983 IL18Q14116 193 aa12.53□□□□□ -0.4
CCNE1-203ENST00000444983 ATXN7L3Q14CW9 347 aaPredicted RBP12.53□□□□□ -0.4
CCNE1-203ENST00000444983 FAM131AQ6UXB0 335 aa12.53□□□□□ -0.4
CCNE1-203ENST00000444983 TMEM185AQ8NFB2 350 aa12.53□□□□□ -0.4
CCNE1-203ENST00000444983 PPP1R35Q8TAP8 253 aa12.53□□□□□ -0.4
CCNE1-203ENST00000444983 C15orf40Q8WUR7 153 aa12.53□□□□□ -0.4
CCNE1-203ENST00000444983 NARFLQ9H6Q4 476 aa12.53□□□□□ -0.4
CCNE1-203ENST00000444983 ABCA2Q9BZC7 2435 aa12.53□□□□□ -0.4
CCNE1-203ENST00000444983 MED13LQ71F56 2210 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 TRBV6-6A0A0A6YYG2 114 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 POM121CA8CG34 1229 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 GPR37O15354 613 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 MT-ND4P03905 459 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 NPY4RP50391 375 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 LRRC10Q5BKY1 277 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 WDR25Q64LD2 544 aaPredicted RBP12.52□□□□□ -0.4
CCNE1-203ENST00000444983 SLC35E4Q6ICL7 350 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 NLRC3Q7RTR2 1065 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 OR8B3Q8NGG8 313 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 MRPL30Q8TCC3 161 aaKnown RBP12.52□□□□□ -0.4
CCNE1-203ENST00000444983 GPX8Q8TED1 209 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 S100ZQ8WXG8 99 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 GCDHQ92947 438 aaPredicted RBP12.52□□□□□ -0.4
CCNE1-203ENST00000444983 OR8B2Q96RD0 313 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 SDHCQ99643 169 aaPredicted RBP12.52□□□□□ -0.4
CCNE1-203ENST00000444983 SRRQ9GZT4 340 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 ETAA1Q9NY74 926 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 PCDHB10Q9UN67 800 aa12.52□□□□□ -0.4
CCNE1-203ENST00000444983 YLPM1P49750 1951 aaKnown RBP12.52□□□□□ -0.41
CCNE1-203ENST00000444983 MYO9AB2RTY4 2548 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 PRSS3P35030 304 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 GLIPR1P48060 266 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 PITPNAQ00169 270 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 CR1LQ2VPA4 569 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 C11orf91Q3C1V1 193 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 ZNF880Q6PDB4 577 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 SNX29P2Q8IUI4 249 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 NUDCD2Q8WVJ2 157 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 HDHD3Q9BSH5 251 aaPredicted RBP12.51□□□□□ -0.41
CCNE1-203ENST00000444983 RIMS4Q9H426 269 aaPredicted RBP12.51□□□□□ -0.41
CCNE1-203ENST00000444983 SCPEP1Q9HB40 452 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 CLN8Q9UBY8 286 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 KIAA1324LA8MWY0 1029 aaPredicted RBP12.51□□□□□ -0.41
CCNE1-203ENST00000444983 A8MXK9 166 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 SULT1C2O00338 296 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 IL2RGP31785 369 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 P2RX3P56373 397 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 MRPS10P82664 201 aaKnown RBP12.51□□□□□ -0.41
CCNE1-203ENST00000444983 GUCA2AQ02747 115 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 GDPD3Q7L5L3 318 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 TPRX1Q8N7U7 411 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 NEK7Q8TDX7 302 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 SMIM4Q8WVI0 70 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 CMSS1Q9BQ75 279 aaKnown RBP12.51□□□□□ -0.41
CCNE1-203ENST00000444983 OCSTAMPQ9BR26 566 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 C12orf4Q9NQ89 552 aa12.51□□□□□ -0.41
CCNE1-203ENST00000444983 MBNL3Q9NUK0 354 aaKnown RBP12.51□□□□□ -0.41
CCNE1-203ENST00000444983 ZNF469Q96JG9 3925 aaPredicted RBP12.5□□□□□ -0.41
CCNE1-203ENST00000444983 GABARAPH6UMI1 98 aa12.5□□□□□ -0.41
CCNE1-203ENST00000444983 H7C1Q1 480 aa12.5□□□□□ -0.41
CCNE1-203ENST00000444983 GSTZ1O43708 216 aaPredicted RBP12.5□□□□□ -0.41
CCNE1-203ENST00000444983 USF1P22415 310 aaPredicted RBP12.5□□□□□ -0.41
CCNE1-203ENST00000444983 LOXL1Q08397 574 aaPredicted RBP12.5□□□□□ -0.41
CCNE1-203ENST00000444983 ARFRP1Q13795 201 aa12.5□□□□□ -0.41
CCNE1-203ENST00000444983 KRBOX4Q5JUW0 171 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms