RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 GEMIN2O14893 280 aaKnown RBP16.37■□□□□ 0.21
PMPCB-204ENST00000444457 GCGP01275 180 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 CTSSP25774 331 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 ASCL1P50553 236 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 EXT1Q16394 746 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 PHYHD1Q5SRE7 291 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 RBMXL1Q96E39 390 aaKnown RBP16.37■□□□□ 0.21
PMPCB-204ENST00000444457 PGAM5Q96HS1 289 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 ANGPTL4Q9BY76 406 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 CCDC163A0A0D9SF12 145 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 PITX3O75364 302 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 CYB5R3P00387 301 aaPredicted RBP16.37■□□□□ 0.21
PMPCB-204ENST00000444457 CFIP05156 583 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 G0S2P27469 103 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 CD200P41217 278 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 PNRC1Q12796 327 aaPredicted RBP16.37■□□□□ 0.21
PMPCB-204ENST00000444457 ARL6IP1Q15041 203 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 C10orf128Q5T292 105 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 RAET1LQ5VY80 246 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 R3HDM4Q96D70 268 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 SNHG12Q9BXW3 62 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 C11orf1Q9H5F2 150 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 PROK2Q9HC23 129 aa16.37■□□□□ 0.21
PMPCB-204ENST00000444457 MCTS1Q9ULC4 181 aaKnown RBP16.37■□□□□ 0.21
PMPCB-204ENST00000444457 IGHV3-15A0A0B4J1V0 119 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 A0A1B0GU03 582 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 ATXN7O15265 892 aaPredicted RBP16.36■□□□□ 0.21
PMPCB-204ENST00000444457 KLF7O75840 302 aaPredicted RBP16.36■□□□□ 0.21
PMPCB-204ENST00000444457 DFFBO76075 338 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 IGLV3-1P01715 115 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 LIFP15018 202 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 GUCA1AP43080 201 aaPredicted RBP16.36■□□□□ 0.21
PMPCB-204ENST00000444457 ALDH3B1P43353 468 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 NUBP1P53384 320 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 MYO7BQ6PIF6 2116 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 LIAT1Q6ZQX7 453 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 TMEM54Q969K7 222 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 REEP6Q96HR9 211 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 LYZL4Q96KX0 146 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 ZNF385AQ96PM9 386 aaKnown RBP16.36■□□□□ 0.21
PMPCB-204ENST00000444457 TM2D1Q9BX74 207 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 LIME1Q9H400 295 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 DSCR4P56555 118 aaPredicted RBP16.36■□□□□ 0.21
PMPCB-204ENST00000444457 ENDOGQ14249 297 aaKnown RBP16.36■□□□□ 0.21
PMPCB-204ENST00000444457 TAF9Q16594 264 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 COA6Q5JTJ3 125 aaKnown RBP16.36■□□□□ 0.21
PMPCB-204ENST00000444457 C1QL2Q7Z5L3 287 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 OR2C3Q8N628 320 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 NAXEQ8NCW5 288 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 OR4D5Q8NGN0 318 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 OR1P1Q8NH06 330 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 OR4X1Q8NH49 305 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 RTN4IP1Q8WWV3 396 aaPredicted RBP16.36■□□□□ 0.21
PMPCB-204ENST00000444457 ZNF160Q9HCG1 818 aa16.36■□□□□ 0.21
PMPCB-204ENST00000444457 RTTNQ86VV8 2226 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 MARCH11A6NNE9 402 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 G3V3Y1 287 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 DBHP09172 617 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 GABRR1P24046 479 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 NOVA1P51513 510 aaKnown RBP16.35■□□□□ 0.21
PMPCB-204ENST00000444457 SSR4P51571 173 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 ZNF133P52736 654 aaPredicted RBP16.35■□□□□ 0.21
PMPCB-204ENST00000444457 GNMTQ14749 295 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 CRIP3Q6Q6R5 217 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 FOXL2NBQ6ZUU3 175 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 GJC3Q8NFK1 279 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 NABP1Q96AH0 204 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 MSI2Q96DH6 328 aaKnown RBP16.35■□□□□ 0.21
PMPCB-204ENST00000444457 UCN2Q96RP3 112 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 ANXA10Q9UJ72 324 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 NPIPA2E9PIF3 369 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 NPIPA3F8WFD2 350 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 ZIC3O60481 467 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 CCL4P13236 92 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 RPL23AP62750 156 aaKnown RBP16.35■□□□□ 0.21
PMPCB-204ENST00000444457 RAB35Q15286 201 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 DMRTC1Q5HYR2 192 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 FAM90A2PQ658T7 463 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 AGBL5Q8NDL9 886 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 LIN37Q96GY3 246 aaPredicted RBP16.35■□□□□ 0.21
PMPCB-204ENST00000444457 ADGRG7Q96K78 797 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 CBY1Q9Y3M2 126 aa16.35■□□□□ 0.21
PMPCB-204ENST00000444457 SDK2Q58EX2 2172 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 ZNF732B4DXR9 585 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 F5H5K5 113 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 HSPA12AO43301 675 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 VAMP5O95183 116 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 OPN1MWP04001 364 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 OPN1MW2P0DN77 364 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 OPN1MW3P0DN78 364 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 EIF3IQ13347 325 aaKnown RBP16.34■□□□□ 0.21
PMPCB-204ENST00000444457 SLC16A14Q7RTX9 510 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 SH2D2AQ9NP31 389 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 LOC102723971A0A1B0GUV8 181 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 IGSF23A1L1A6 192 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 FAM24AA6NFZ4 105 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 ZNF705GA8MUZ8 300 aaPredicted RBP16.34■□□□□ 0.21
PMPCB-204ENST00000444457 NTN3O00634 580 aaPredicted RBP16.34■□□□□ 0.21
PMPCB-204ENST00000444457 ZNF728P0DKX0 622 aa16.34■□□□□ 0.21
PMPCB-204ENST00000444457 KISS1Q15726 138 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms