RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 MGST3O14880 152 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 HMGB3O15347 200 aaKnown RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 FABP7O15540 132 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 MLNRO43193 412 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 RBFOX2O43251 390 aaKnown RBP eCLIP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 SPRY1O43609 319 aaPredicted RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 TIMM8AO60220 97 aaPredicted RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 SOX15O60248 233 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 YPEL1O60688 119 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 ZG16O60844 167 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 NDUFS6O75380 124 aaKnown RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 NXPH2O95156 264 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 PPYP01298 95 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 IFNA2P01563 188 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 IFNA7P01567 189 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 IFNA21P01568 189 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 RBP4P02753 201 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 HPXP02790 462 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 RLN2P04090 185 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 RLN1P04808 185 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 DUX4L2P0CJ85 424 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 DUX4L3P0CJ86 424 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 DUX4L4P0CJ87 422 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 DUX4L5P0CJ88 424 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 DUX4L6P0CJ89 424 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 DUX4L7P0CJ90 424 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF728P0DKX0 622 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 RPS2P15880 293 aaKnown RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 PRKACAP17612 351 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 CXCL3P19876 107 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 BCL3P20749 454 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 VDAC1P21796 283 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 CA6P23280 308 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 S100A1P23297 94 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 GLRA1P23415 457 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 GABRR1P24046 479 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 UCP1P25874 307 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 PSMB6P28072 239 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 CD34P28906 385 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 S100A11P31949 105 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 NPBWR2P48146 333 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 PPOXP50336 477 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 ATP5IP56385 69 aaPredicted RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 HERV-K104P61576 105 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 HLA-DRB3P79483 266 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 GUCA2AQ02747 115 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 MEF2CQ06413 473 aaPredicted RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 PLA2G7Q13093 441 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 CBX3Q13185 183 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 HLXQ14774 488 aaPredicted RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 DAZAP2Q15038 168 aaPredicted RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 FCN2Q15485 313 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 HMGN3Q15651 99 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 C3AR1Q16581 482 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 BEX5Q5H9J7 111 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 TMEM255AQ5JRV8 349 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 GPR157Q5UAW9 335 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 OTPQ5XKR4 325 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 OR2T2Q6IF00 324 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 EIF5AL1Q6IS14 154 aaKnown RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 FAM71F2Q6NXP2 309 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 HAGHLQ6PII5 290 aaPredicted RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 PCSK4Q6UW60 755 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 GSG1LQ6UXU4 331 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF66Q6ZN08 573 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 ACP7Q6ZNF0 438 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 C1orf122Q6ZSJ8 110 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 ACOT7LQ6ZUV0 252 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 C11orf53Q8IXP5 236 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 H1FOOQ8IZA3 346 aaPredicted RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 LGI3Q8N145 548 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 CISD2Q8N5K1 135 aaKnown RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 GVQW1Q8N7I0 195 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 SUMF2Q8NBJ7 301 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 BHLHE23Q8NDY6 225 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 OR8H1Q8NGG4 311 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 OR4D10Q8NGI6 311 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 OR11L1Q8NGX0 322 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 OR2T35Q8NGX2 323 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 OR10J5Q8NHC4 309 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 MRPL30Q8TCC3 161 aaKnown RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 NUDCD2Q8WVJ2 157 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 EXTL1Q92935 676 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 LSM10Q969L4 123 aaKnown RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 S100PBPQ96BU1 408 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 GALMQ96C23 342 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 RAB39BQ96DA2 213 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 ANAPC16Q96DE5 110 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 C2orf50Q96LR7 162 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 YPEL2Q96QA6 119 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 FYTTD1Q96QD9 318 aaKnown RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 SPACA5Q96QH8 159 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 NKX3-1Q99801 234 aaPredicted RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 SULT4A1Q9BR01 284 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 RTBDNQ9BSG5 229 aaPredicted RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 TMEM204Q9BSN7 226 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 FAAP24Q9BTP7 215 aa2.39□□□□□ -2.03
LINC00393-201ENST00000443621 DPCDQ9BVM2 203 aaPredicted RBP2.39□□□□□ -2.03
LINC00393-201ENST00000443621 FGF23Q9GZV9 251 aaPredicted RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms