RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 ZBTB32Q9Y2Y4 487 aaPredicted RBP9□□□□□ -0.97
SYNE2-206ENST00000441438 OR51F1A6NGY5 319 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 SAP18O00422 153 aaKnown RBP8.99□□□□□ -0.97
SYNE2-206ENST00000441438 ATP5LO75964 103 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 ZNF432O94892 652 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 NRASP01111 189 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 PSG2P11465 335 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 GZMMP51124 257 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 SPHARQ15513 63 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 LINC01561Q8N1V8 128 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 ZNRF2Q8NHG8 242 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 IP6K3Q96PC2 410 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 SAP30LQ9HAJ7 183 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 MED29Q9NX70 200 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 POMT2Q9UKY4 750 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 MMP17Q9ULZ9 603 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 OR51B2Q9Y5P1 312 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 TAPBPO15533 448 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 WISP3O95389 354 aaPredicted RBP8.99□□□□□ -0.97
SYNE2-206ENST00000441438 FSTP19883 344 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 IL10RBQ08334 325 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 PRSS36Q5K4E3 855 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 ZNF678Q5SXM1 525 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 SAMD5Q5TGI4 173 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 FBXW12Q6X9E4 464 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 ZNF689Q96CS4 500 aaPredicted RBP8.99□□□□□ -0.97
SYNE2-206ENST00000441438 DUSP23Q9BVJ7 150 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 PRORYQ9H606 182 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 ACOT13Q9NPJ3 140 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 WDR83OSQ9Y284 106 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 ACRV1P26436 265 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 GPR6P46095 362 aaPredicted RBP8.99□□□□□ -0.97
SYNE2-206ENST00000441438 CD164Q04900 197 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 C1orf194Q5T5A4 169 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 ZFAND6Q6FIF0 208 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 GATD1Q8NB37 220 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 OR10AD1Q8NGE0 317 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 THAP6Q8TBB0 222 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 SLC25A43Q8WUT9 341 aaPredicted RBP8.99□□□□□ -0.97
SYNE2-206ENST00000441438 HSPB9Q9BQS6 159 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 TPSG1Q9NRR2 321 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 DOK5Q9P104 306 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 TMED3Q9Y3Q3 217 aa8.99□□□□□ -0.97
SYNE2-206ENST00000441438 PGCP20142 388 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 CD34P28906 385 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 TSFMP43897 325 aaKnown RBP8.98□□□□□ -0.97
SYNE2-206ENST00000441438 CCL23P55773 120 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 SLC35A2P78381 396 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 MRPS6P82932 125 aaKnown RBP8.98□□□□□ -0.97
SYNE2-206ENST00000441438 ZNF266Q14584 549 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 TCTN1Q2MV58 587 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 OTPQ5XKR4 325 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 OR2L13Q8N349 312 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 SCCPDHQ8NBX0 429 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 WDYHV1Q96HA8 205 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 PILRAQ9UKJ1 303 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 HS3ST2Q9Y278 367 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 TPRKBQ9Y3C4 175 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 DNAJC15Q9Y5T4 150 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 CCL24O00175 119 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 TMPRSS11DO60235 418 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 SMIM17P0DL12 118 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 RPS3P23396 243 aaKnown RBP eCLIP8.98□□□□□ -0.97
SYNE2-206ENST00000441438 MYL9P24844 172 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 GNG5P63218 68 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 SRYQ05066 204 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 DUSP2Q05923 314 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 MCFD2Q8NI22 146 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 RBM22Q9NW64 420 aaKnown RBP eCLIP8.98□□□□□ -0.97
SYNE2-206ENST00000441438 SLC23A2Q9UGH3 650 aa8.98□□□□□ -0.97
SYNE2-206ENST00000441438 NUP214P35658 2090 aaPredicted RBP8.98□□□□□ -0.97
SYNE2-206ENST00000441438 MSGN1A6NI15 193 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 TAAR5O14804 337 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 GCM2O75603 506 aaPredicted RBP8.97□□□□□ -0.97
SYNE2-206ENST00000441438 HTR1DP28221 377 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 TMEM236Q5W0B7 351 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 RTL6Q6ICC9 239 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 OR4N5Q8IXE1 308 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 OR4F5Q8NH21 305 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 MALSU1Q96EH3 234 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 GFM1Q96RP9 751 aaKnown RBP8.97□□□□□ -0.97
SYNE2-206ENST00000441438 MGLLQ99685 303 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 PELI2Q9HAT8 420 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 NSG2Q9Y328 171 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 SCN5AQ14524 2016 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 A0A0U1RQF3 1178 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 FABP5P3A8MUU1 101 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 HBZP02008 142 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 REG1AP05451 166 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 RPL29P47914 159 aaKnown RBP8.97□□□□□ -0.97
SYNE2-206ENST00000441438 TFPI2P48307 235 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 CFAP52Q8N1V2 620 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 VN1R17PQ8TDU5 208 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 SMIM14Q96QK8 99 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 SLC25A39Q9BZJ4 359 aaPredicted RBP8.97□□□□□ -0.97
SYNE2-206ENST00000441438 NUFIP1Q9UHK0 495 aaKnown RBP8.97□□□□□ -0.97
SYNE2-206ENST00000441438 PKIGQ9Y2B9 76 aa8.97□□□□□ -0.97
SYNE2-206ENST00000441438 TMEM269A0A1B0GVZ9 245 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 D6RAR5 112 aa8.96□□□□□ -0.97
SYNE2-206ENST00000441438 HLA-DQB2P05538 268 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms