RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 SPATA2Q9UM82 520 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 CMAHPQ9Y471 501 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 MPC1Q9Y5U8 109 aa3.95□□□□□ -1.78
PTPN4-206ENST00000441089 A0A0A6YYD4 124 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 TMEM14DPA8MWL7 114 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 F5H5P2 479 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 F8VVB4 439 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 F8VWA3 439 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 SPRY3O43610 288 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 SYNGR1O43759 233 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 RHBDL1O75783 438 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 NUDT3O95989 172 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 IGHV1-46P01743 117 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 OR4A8P0C604 315 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 CALCBP10092 127 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 GYPEP15421 78 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 ELK1P19419 428 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 MPZP25189 248 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 TNFSF8P32971 234 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 PMELP40967 661 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 ETV6P41212 452 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 PTGFRP43088 359 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 ALDH3B1P43353 468 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 EVX1P49640 407 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 PSMD7P51665 324 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 FUT6P51993 359 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 ATP1B3P54709 279 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 MTCP1P56278 107 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 TMEM33P57088 247 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 KLF3P57682 345 aaPredicted RBP3.94□□□□□ -1.78
PTPN4-206ENST00000441089 LMO4P61968 165 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 RPS23P62266 143 aaKnown RBP3.94□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF154Q13106 437 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 DYNC1I2Q13409 638 aaKnown RBP3.94□□□□□ -1.78
PTPN4-206ENST00000441089 OR8G1Q15617 311 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 EFNB3Q15768 340 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 MPPED2Q15777 294 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 FAM76BQ5HYJ3 339 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 CASC10Q5T4H9 136 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 PRAMEF6Q5VXH4 476 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 GLIPR1L1Q6UWM5 242 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 UNQ6126/PRO20091Q6UXV3 157 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 ASCL4Q6XD76 172 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 LHFPL2Q6ZUX7 228 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 SLC25A26Q70HW3 274 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 CROCCP3Q8IVE0 287 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 CDH26Q8IXH8 852 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 C1orf174Q8IYL3 243 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 IZUMO1Q8IYV9 350 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 BATF2Q8N1L9 274 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 SAMD12Q8N8I0 201 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 OR4M1Q8NGD0 313 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 OR5A2Q8NGI9 324 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 OR10K1Q8NGX5 313 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 TNFAIP8L1Q8WVP5 186 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 ACOT12Q8WYK0 555 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 AP3S1Q92572 193 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 FAM3DQ96BQ1 224 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 RAB39BQ96DA2 213 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 BORCS8Q96FH0 119 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 ZNF488Q96MN9 340 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 TECTBQ96PL2 329 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 TSC22D3Q99576 134 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 SDHCQ99643 169 aaPredicted RBP3.94□□□□□ -1.78
PTPN4-206ENST00000441089 GAL3ST1Q99999 423 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 B9D2Q9BPU9 175 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 SOSTQ9BQB4 213 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 UQCC2Q9BRT2 126 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 NICN1Q9BSH3 213 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 ADAT1Q9BUB4 502 aaKnown RBP3.94□□□□□ -1.78
PTPN4-206ENST00000441089 OR51I2Q9H344 312 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 MS4A5Q9H3V2 200 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 PLK3Q9H4B4 646 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 PRDM13Q9H4Q3 707 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 BANF2Q9H503 90 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 NARFLQ9H6Q4 476 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 TMEM100Q9NV29 134 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 ABRACLQ9P1F3 81 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 TAAR3PQ9P1P4 343 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 ING4Q9UNL4 249 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 MRPS28Q9Y2Q9 187 aaKnown RBP3.94□□□□□ -1.78
PTPN4-206ENST00000441089 V9GYH0 126 aa3.94□□□□□ -1.78
PTPN4-206ENST00000441089 OR5B21A6NL26 309 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 FOXI3A8MTJ6 420 aaPredicted RBP3.93□□□□□ -1.78
PTPN4-206ENST00000441089 FAM25AB3EWG3 89 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 FAM25CB3EWG5 89 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 FAM25GB3EWG6 89 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 J3QRK9 145 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 J3QT63 122 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 CDIPTO14735 213 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 MAGEB3O15480 346 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 RGS5O15539 181 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 TMEM127O75204 238 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 PTBP3O95758 552 aaKnown RBP3.93□□□□□ -1.78
PTPN4-206ENST00000441089 GRPP07492 148 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 SFTPBP07988 381 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 NHLRC4P0CG21 123 aaPredicted RBP3.93□□□□□ -1.78
PTPN4-206ENST00000441089 TMEM225BP0DP42 221 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 PTHLHP12272 177 aa3.93□□□□□ -1.78
PTPN4-206ENST00000441089 ARSBP15848 533 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms