RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 FSCN3Q9NQT6 498 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 OR2W1Q9Y3N9 320 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 WSB1Q9Y6I7 421 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 MAP1LC3B2A6NCE7 125 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 SYNGR2O43760 224 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 HYAL3O43820 417 aaPredicted RBP5.6□□□□□ -1.51
CNOT1-202ENST00000441024 HLA-DQB1P01920 261 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 CD3EP07766 207 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 PMELP40967 661 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 TMEM33P57088 247 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 PMP22Q01453 160 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 PDCD1Q15116 288 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 ALKBH6Q3KRA9 238 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 LYG1Q8N1E2 194 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 CRIPAKQ8N1N5 446 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 OR11H7Q8NGC8 314 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 DIRC2Q96SL1 478 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 HSD17B10Q99714 261 aaKnown RBP5.6□□□□□ -1.51
CNOT1-202ENST00000441024 MAP1LC3BQ9GZQ8 125 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 MANBALQ9NQG1 85 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 COL4A2P08572 1712 aa5.6□□□□□ -1.51
CNOT1-202ENST00000441024 EPOPA6NHQ4 379 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 G3V3Q6 166 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 DVL1O14640 695 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 LANCL1O43813 399 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 UPK3AO75631 287 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 NAT2P11245 290 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 CTRB1P17538 263 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 RBM11P57052 281 aaKnown RBP5.59□□□□□ -1.51
CNOT1-202ENST00000441024 TMEM267Q0VDI3 215 aaPredicted RBP5.59□□□□□ -1.51
CNOT1-202ENST00000441024 PNRC1Q12796 327 aaPredicted RBP5.59□□□□□ -1.51
CNOT1-202ENST00000441024 BATFQ16520 125 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 TMEM241Q24JQ0 296 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 MOGAT2Q3SYC2 334 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 RIPPLY2Q5TAB7 128 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 CTRB2Q6GPI1 263 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 ETV3LQ6ZN32 361 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 CXorf67Q86X51 503 aaPredicted RBP5.59□□□□□ -1.51
CNOT1-202ENST00000441024 TCTEX1D1Q8N7M0 179 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 RAB1CQ92928 201 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 TMEM18Q96B42 140 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 KCNK15Q9H427 330 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 SMOC1Q9H4F8 434 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 GAR1Q9NY12 217 aaKnown RBP5.59□□□□□ -1.51
CNOT1-202ENST00000441024 KCNE5Q9UJ90 142 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 SF3B6Q9Y3B4 125 aaKnown RBP5.59□□□□□ -1.51
CNOT1-202ENST00000441024 CLDN34H7C241 214 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 KLF4O43474 513 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 UCNP55089 124 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 NAAAQ02083 359 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 TIPARPQ7Z3E1 657 aaKnown RBP5.59□□□□□ -1.51
CNOT1-202ENST00000441024 VASH2Q86V25 355 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 CHAC2Q8WUX2 184 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 RPEQ96AT9 228 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 ABHD14BQ96IU4 210 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 SH2D2AQ9NP31 389 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 FAM96BQ9Y3D0 163 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 PLXNA3P51805 1871 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 TMEM229AB2RXF0 380 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 H3BP45 60 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 CDK2AP1O14519 115 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 YIF1AO95070 293 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 HPXP02790 462 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 CCL2P13500 99 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 MRPS11P82912 194 aaKnown RBP5.59□□□□□ -1.51
CNOT1-202ENST00000441024 P2RY6Q15077 328 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 CEACAM21Q3KPI0 293 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 SAXO1Q8IYX7 474 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 MRGPRDQ8TDS7 321 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 ZNF385AQ96PM9 386 aaKnown RBP5.59□□□□□ -1.51
CNOT1-202ENST00000441024 ZNF665Q9H7R5 613 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 ZNF586Q9NXT0 402 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 CHD7Q9P2D1 2997 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 MRPS18BQ9Y676 258 aaKnown RBP5.59□□□□□ -1.51
CNOT1-202ENST00000441024 PLXNA4Q9HCM2 1894 aa5.59□□□□□ -1.51
CNOT1-202ENST00000441024 NYNRINQ9P2P1 1898 aaKnown RBP5.59□□□□□ -1.52
CNOT1-202ENST00000441024 A0A1W2PR80 420 aa5.59□□□□□ -1.52
CNOT1-202ENST00000441024 CRYM-AS1A6NIL9 109 aa5.59□□□□□ -1.52
CNOT1-202ENST00000441024 MS4A18H0YCH9 400 aa5.59□□□□□ -1.52
CNOT1-202ENST00000441024 EFEMP2O95967 443 aa5.59□□□□□ -1.52
CNOT1-202ENST00000441024 IGKV3-11P04433 115 aa5.59□□□□□ -1.52
CNOT1-202ENST00000441024 BMP5P22003 454 aa5.59□□□□□ -1.52
CNOT1-202ENST00000441024 GNB2P62879 340 aa5.59□□□□□ -1.52
CNOT1-202ENST00000441024 MS4A18Q3C1V0 323 aa5.59□□□□□ -1.52
CNOT1-202ENST00000441024 KRTCAP3Q53RY4 240 aa5.59□□□□□ -1.52
CNOT1-202ENST00000441024 SFTPA2Q8IWL1 248 aa5.59□□□□□ -1.52
CNOT1-202ENST00000441024 TMEM104Q8NE00 496 aa5.59□□□□□ -1.52
CNOT1-202ENST00000441024 ABHD3Q8WU67 409 aa5.59□□□□□ -1.52
CNOT1-202ENST00000441024 R3HDM4Q96D70 268 aa5.59□□□□□ -1.52
CNOT1-202ENST00000441024 TRMT61AQ96FX7 289 aaKnown RBP5.59□□□□□ -1.52
CNOT1-202ENST00000441024 GINS3Q9BRX5 216 aa5.59□□□□□ -1.52
CNOT1-202ENST00000441024 PATE3B3GLJ2 98 aa5.58□□□□□ -1.52
CNOT1-202ENST00000441024 B4DEV8 164 aa5.58□□□□□ -1.52
CNOT1-202ENST00000441024 CLEC3BP05452 202 aa5.58□□□□□ -1.52
CNOT1-202ENST00000441024 SEC11BP0C7V7 166 aa5.58□□□□□ -1.52
CNOT1-202ENST00000441024 PRF1P14222 555 aa5.58□□□□□ -1.52
CNOT1-202ENST00000441024 CDC34P49427 236 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-202ENST00000441024 EFNB2P52799 333 aa5.58□□□□□ -1.52
CNOT1-202ENST00000441024 RPS4XP62701 263 aaKnown RBP5.58□□□□□ -1.52
CNOT1-202ENST00000441024 COX19Q49B96 90 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms