RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TGOLN2O43493 480 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 DDAH2O95865 285 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 PGA4P0DJD7 388 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 PGA5P0DJD9 388 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 GLI4P10075 376 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 CCL1P22362 96 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 HLA-DRB3P79483 266 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 JOSD1Q15040 202 aaPredicted RBP7.43□□□□□ -1.22
HPS4-206ENST00000439453 MYO7BQ6PIF6 2116 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 CRIP3Q6Q6R5 217 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 FAM57BQ71RH2 274 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 FBXL14Q8N1E6 418 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 PLPP5Q8NEB5 264 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 OR14L1PQ8NHC6 308 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 RCC1LQ96I51 464 aaKnown RBP7.43□□□□□ -1.22
HPS4-206ENST00000439453 NOL4LQ96MY1 436 aaPredicted RBP7.43□□□□□ -1.22
HPS4-206ENST00000439453 ANXA10Q9UJ72 324 aa7.43□□□□□ -1.22
HPS4-206ENST00000439453 NPIPB13A6NJU9 1138 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 NPIPB4C9JG80 1138 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 DVL1O14640 695 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 JMJD7P0C870 316 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 ALDH3B1P43353 468 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 CASP6P55212 293 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 IL11RAQ14626 422 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 PHLDA2Q53GA4 152 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 SP5Q6BEB4 398 aaPredicted RBP7.42□□□□□ -1.22
HPS4-206ENST00000439453 SNX22Q96L94 193 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 NDUFAF3Q9BU61 184 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 MRPL37Q9BZE1 423 aaKnown RBP7.42□□□□□ -1.22
HPS4-206ENST00000439453 CHST11Q9NPF2 352 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 LANCL2Q9NS86 450 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 PLEKHJ1Q9NW61 149 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 PITPNC1Q9UKF7 332 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 NXT1Q9UKK6 140 aaKnown RBP7.42□□□□□ -1.22
HPS4-206ENST00000439453 EPG5Q9HCE0 2579 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 ACACAQ13085 2346 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 B4DEV8 164 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 MSTNO14793 375 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 ZNF205O95201 554 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 DBHP09172 617 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 TUBG1P23258 451 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 GABRR1P24046 479 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 DCAF7P61962 342 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 NUTF2P61970 127 aaKnown RBP7.42□□□□□ -1.22
HPS4-206ENST00000439453 C9orf40Q8IXQ3 194 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 LGI3Q8N145 548 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 OR2C3Q8N628 320 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 RAB24Q969Q5 203 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 FGF21Q9NSA1 209 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 IGSF10Q6WRI0 2623 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 TMEM150CB9EJG8 249 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 PITX3O75364 302 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 GZMBP10144 247 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 FXYD4P59646 89 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 SPACA3Q8IXA5 215 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 ZNF664Q8N3J9 261 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 OR5L1Q8NGL2 311 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 CLDND2Q8NHS1 167 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 MSI2Q96DH6 328 aaKnown RBP7.42□□□□□ -1.22
HPS4-206ENST00000439453 KLHL13Q9P2N7 655 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 PTPRQQ9UMZ3 2332 aa7.42□□□□□ -1.22
HPS4-206ENST00000439453 IGSF23A1L1A6 192 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 ZNF850A8MQ14 1090 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 HSPA12AO43301 675 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 CDAP32320 146 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 OR1D4P47884 311 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 RND2P52198 227 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 RPL23AP62750 156 aaKnown RBP7.41□□□□□ -1.22
HPS4-206ENST00000439453 ZNF283Q8N7M2 679 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 OR4D5Q8NGN0 318 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 POM121Q96HA1 1249 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 NECAP2Q9NVZ3 263 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 GEMIN2O14893 280 aaKnown RBP7.41□□□□□ -1.22
HPS4-206ENST00000439453 FCGR2AP12318 317 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 FUT3P21217 361 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 OMGP23515 440 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 RRADP55042 308 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 DCAF12Q5T6F0 453 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 SLC16A14Q7RTX9 510 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 BEND2Q8NDZ0 799 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 CA5BP1Q8WTZ4 195 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 TMEM234Q8WY98 164 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 C11orf1Q9H5F2 150 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 SLC7A11Q9UPY5 501 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 CLDN34H7C241 214 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 RER1O15258 196 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 OPRM1P35372 400 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 CD200P41217 278 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 P4HA3Q7Z4N8 544 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 C5orf24Q7Z6I8 188 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 TMEM183AQ8IXX5 376 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 RNASEH2CQ8TDP1 164 aaKnown RBP7.41□□□□□ -1.22
HPS4-206ENST00000439453 HAS2Q92819 552 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 RBMXL1Q96E39 390 aaKnown RBP7.41□□□□□ -1.22
HPS4-206ENST00000439453 GPR87Q9BY21 358 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 SLC2A9Q9NRM0 540 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 AHCTF1Q8WYP5 2266 aa7.41□□□□□ -1.22
HPS4-206ENST00000439453 TNRC6AQ8NDV7 1962 aaKnown RBP7.4□□□□□ -1.22
HPS4-206ENST00000439453 C5orf63A6NC05 138 aa7.4□□□□□ -1.22
HPS4-206ENST00000439453 E9PLN8 166 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms