RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 MOB3BQ86TA1 216 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 NFAM1Q8NET5 270 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-209ENST00000437951 OR10AG1Q8NH19 301 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 SGMS2Q8NHU3 365 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 ERRFI1Q9UJM3 462 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-209ENST00000437951 A0A1W2PR48 441 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 SLC35B1P78383 322 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 MRPL58Q14197 206 aaKnown RBP10.26□□□□□ -0.77
PTCH1-209ENST00000437951 NUP37Q8NFH4 326 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 SFRP2Q96HF1 295 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 GPR3P46089 330 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 KLF3P57682 345 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-209ENST00000437951 SPACA5Q96QH8 159 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 ZNF865P0CJ78 1059 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-209ENST00000437951 LYPD8Q6UX82 237 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 GGACTQ9BVM4 153 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 TMEFF2Q9UIK5 374 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-209ENST00000437951 PRNDQ9UKY0 176 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 CLDN16Q9Y5I7 305 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 ATP23Q9Y6H3 246 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 EIF3GO75821 320 aaKnown RBP eCLIP10.26□□□□□ -0.77
PTCH1-209ENST00000437951 FAM157CP0CG43 387 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 PTCRAQ6ISU1 281 aaPredicted RBP10.26□□□□□ -0.77
PTCH1-209ENST00000437951 MRPL54Q6P161 138 aaKnown RBP10.26□□□□□ -0.77
PTCH1-209ENST00000437951 TGIF2LYQ8IUE0 185 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 LSM10Q969L4 123 aaKnown RBP10.26□□□□□ -0.77
PTCH1-209ENST00000437951 RARRES2Q99969 163 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 CLN8Q9UBY8 286 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 A0A1B0GUL6 1792 aa10.26□□□□□ -0.77
PTCH1-209ENST00000437951 DNASE2O00115 360 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-209ENST00000437951 NGFP01138 241 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 FCARP24071 287 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 ZNF880Q6PDB4 577 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 LGALS3P17931 250 aaKnown RBP10.25□□□□□ -0.77
PTCH1-209ENST00000437951 CA13Q8N1Q1 262 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 LINC00469Q8N7U9 141 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 HSD17B10Q99714 261 aaKnown RBP10.25□□□□□ -0.77
PTCH1-209ENST00000437951 SLC52A3Q9NQ40 469 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 ARFGEF3Q5TH69 2177 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 CDK2AP1O14519 115 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 ZNF506Q5JVG8 444 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 NRIP2Q9BQI9 281 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 NTMQ9P121 344 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 CEP290O15078 2479 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 TOPAZ1Q8N9V7 1692 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 C1QTNF9BB2RNN3 333 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 FCGR3BO75015 233 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 ZNF250P15622 560 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 TEPPQ6URK8 271 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 LINC00696Q6ZRV3 163 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 OR11H7Q8NGC8 314 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 SLC25A17O43808 307 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 PCBP3P57721 371 aaKnown RBP10.25□□□□□ -0.77
PTCH1-209ENST00000437951 EWSR1Q01844 656 aaKnown RBP eCLIP10.25□□□□□ -0.77
PTCH1-209ENST00000437951 SLC25A30Q5SVS4 291 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 TCF23Q7RTU1 214 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 SYT8Q8NBV8 401 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 PTX4Q96A99 478 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 C5P01031 1676 aa10.25□□□□□ -0.77
PTCH1-209ENST00000437951 SERTM1A2A2V5 107 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 SPRY1O43609 319 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-209ENST00000437951 ICOSLGO75144 302 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 EPPINO95925 133 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 SEMG1P04279 462 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 INSM1Q01101 510 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-209ENST00000437951 FBXL14Q8N1E6 418 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 RND1Q92730 232 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 RHOVQ96L33 236 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 TXNRD2Q9NNW7 524 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 JKAMPQ9P055 326 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 SOD3P08294 240 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 LYZP61626 148 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 RIPPLY2Q5TAB7 128 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 ZNF770Q6IQ21 691 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-209ENST00000437951 RPS19BP1Q86WX3 136 aaKnown RBP10.24□□□□□ -0.77
PTCH1-209ENST00000437951 NT5CQ8TCD5 201 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 PAAF1Q9BRP4 392 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 DSCR4P56555 118 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-209ENST00000437951 OR4P4Q8NGL7 312 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 MIXL1Q9H2W2 232 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 NPIPB6E9PJ23 425 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 DAOP14920 347 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 RNPS1Q15287 305 aaKnown RBP10.24□□□□□ -0.77
PTCH1-209ENST00000437951 MICBQ29980 383 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 OR1N1Q8NGS0 311 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 SARAFQ96BY9 339 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 ZNF502Q8TBZ5 544 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 DHHO43323 396 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 PRKRAO75569 313 aaKnown RBP10.24□□□□□ -0.77
PTCH1-209ENST00000437951 KBTBD11O94819 623 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 KLF9Q13886 244 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-209ENST00000437951 FAM53BQ14153 422 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 WDR38Q5JTN6 314 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 FAM27D1Q5T7N8 215 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 TMEM207Q6UWW9 146 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 OR13G1Q8NGZ3 307 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 PTPMT1Q8WUK0 201 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-209ENST00000437951 MRAP2Q96G30 205 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 MAP1LC3AQ9H492 121 aa10.24□□□□□ -0.77
PTCH1-209ENST00000437951 WNT16Q9UBV4 365 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms