RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 ZPLD1Q8TCW7 415 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 HARBI1Q96MB7 349 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 WDR13Q9H1Z4 485 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 TIMM23BQ5SRD1 257 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 HIST2H3AQ71DI3 136 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 LINC01560Q8TB33 94 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 TMPRSS13Q9BYE2 586 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 WDR61Q9GZS3 305 aaKnown RBP13.61□□□□□ -0.23
NEDD4-202ENST00000435532 CACNG5Q9UF02 275 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 KPTNQ9Y664 436 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 ATG2BQ96BY7 2078 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 C9orf172C9J069 976 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 IGHA1P01876 353 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 LYZP61626 148 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 SURF2Q15527 256 aaPredicted RBP13.61□□□□□ -0.23
NEDD4-202ENST00000435532 OR1L6Q8NGR2 347 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 Q8WTZ3 238 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 NEU4Q8WWR8 484 aaPredicted RBP13.61□□□□□ -0.23
NEDD4-202ENST00000435532 J3QW42 95 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 Q6ZT83 130 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 BAGE3Q86Y29 109 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 BAGE2Q86Y30 109 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 TMEM45BQ96B21 275 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 ANXA10Q9UJ72 324 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 ATP6V1G2-DDX39BF2Z307 99 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 LALBAP00709 142 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 IL11P20809 199 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 ID1P41134 155 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 ECSCRQ19T08 205 aa13.61□□□□□ -0.23
NEDD4-202ENST00000435532 KRBOX1C9JBD0 128 aa13.6□□□□□ -0.23
NEDD4-202ENST00000435532 CTSDP07339 412 aaPredicted RBP13.6□□□□□ -0.23
NEDD4-202ENST00000435532 CRYBB2P43320 205 aa13.6□□□□□ -0.23
NEDD4-202ENST00000435532 TNFSF10P50591 281 aa13.6□□□□□ -0.23
NEDD4-202ENST00000435532 LINC00303Q3SY05 128 aa13.6□□□□□ -0.23
NEDD4-202ENST00000435532 SNX22Q96L94 193 aa13.6□□□□□ -0.23
NEDD4-202ENST00000435532 LINC00470Q9BZP3 86 aa13.6□□□□□ -0.23
NEDD4-202ENST00000435532 GSTZ1O43708 216 aaPredicted RBP13.6□□□□□ -0.23
NEDD4-202ENST00000435532 SMAD7O15105 426 aaKnown RBP13.6□□□□□ -0.23
NEDD4-202ENST00000435532 NUPL2O15504 423 aaKnown RBP13.6□□□□□ -0.23
NEDD4-202ENST00000435532 SP6Q3SY56 376 aa13.6□□□□□ -0.23
NEDD4-202ENST00000435532 SRXN1Q9BYN0 137 aa13.6□□□□□ -0.23
NEDD4-202ENST00000435532 UMAD1C9J7I0 102 aa13.6□□□□□ -0.23
NEDD4-202ENST00000435532 SLC16A12Q6ZSM3 486 aa13.6□□□□□ -0.23
NEDD4-202ENST00000435532 ZNF439Q8NDP4 499 aa13.6□□□□□ -0.23
NEDD4-202ENST00000435532 SIGLEC12Q96PQ1 595 aa13.6□□□□□ -0.23
NEDD4-202ENST00000435532 LOC105371242A0A075B767 164 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 IGHV1-69-2A0A0G2JMI3 117 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 OR13C7P0DN81 318 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 MC5RP33032 325 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 ST3GAL2Q16842 350 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 FAM162BQ5T6X4 162 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 CXorf58Q96LI9 332 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 RAB29O14966 203 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 CFHR1Q03591 330 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 AESQ08117 197 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 GLCCI1Q86VQ1 547 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 H3BP45 60 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 SPP1P10451 314 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 DOCK3Q8IZD9 2030 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 LEUTXA8MZ59 168 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 IGKV3-11P04433 115 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 P2RX3P56373 397 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 TOR2AQ5JU69 321 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 RPUSD3Q6P087 351 aaKnown RBP13.59□□□□□ -0.23
NEDD4-202ENST00000435532 UNQ6494/PRO21346Q6UXR6 183 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 CTHRC1Q96CG8 243 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 MIA3Q5JRA6 1907 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 CENPVL1A0A0U1RR11 272 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 DBX1A6NMT0 343 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 OR4C45A6NMZ5 311 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 NQO2P16083 231 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 GPX7Q96SL4 187 aaPredicted RBP13.59□□□□□ -0.23
NEDD4-202ENST00000435532 SRRQ9GZT4 340 aa13.59□□□□□ -0.23
NEDD4-202ENST00000435532 SYNGR1O43759 233 aa13.58□□□□□ -0.23
NEDD4-202ENST00000435532 NDUFB6O95139 128 aa13.58□□□□□ -0.23
NEDD4-202ENST00000435532 CLDN14O95500 239 aa13.58□□□□□ -0.23
NEDD4-202ENST00000435532 NDUFA6P56556 154 aa13.58□□□□□ -0.23
NEDD4-202ENST00000435532 LRRTM1Q86UE6 522 aa13.58□□□□□ -0.23
NEDD4-202ENST00000435532 C1orf162Q8NEQ5 155 aaPredicted RBP13.58□□□□□ -0.23
NEDD4-202ENST00000435532 KCNK17Q96T54 332 aa13.58□□□□□ -0.23
NEDD4-202ENST00000435532 TGFBR1P36897 503 aa13.58□□□□□ -0.24
NEDD4-202ENST00000435532 ZNF90Q03938 601 aa13.58□□□□□ -0.24
NEDD4-202ENST00000435532 ZFP36L1Q07352 338 aaKnown RBP13.58□□□□□ -0.24
NEDD4-202ENST00000435532 ENDOGQ14249 297 aaKnown RBP13.58□□□□□ -0.24
NEDD4-202ENST00000435532 OR10A7Q8NGE5 316 aa13.58□□□□□ -0.24
NEDD4-202ENST00000435532 OR1L8Q8NGR8 309 aa13.58□□□□□ -0.24
NEDD4-202ENST00000435532 RBPMSQ93062 196 aaKnown RBP13.58□□□□□ -0.24
NEDD4-202ENST00000435532 MRPS18CQ9Y3D5 142 aaKnown RBP13.58□□□□□ -0.24
NEDD4-202ENST00000435532 C1QBP02746 253 aa13.58□□□□□ -0.24
NEDD4-202ENST00000435532 SLC25A5P05141 298 aaKnown RBP13.58□□□□□ -0.24
NEDD4-202ENST00000435532 ZNF273Q14593 569 aa13.58□□□□□ -0.24
NEDD4-202ENST00000435532 FFAR4Q5NUL3 377 aa13.58□□□□□ -0.24
NEDD4-202ENST00000435532 TBC1D26Q86UD7 250 aa13.58□□□□□ -0.24
NEDD4-202ENST00000435532 OR1L1Q8NH94 360 aa13.58□□□□□ -0.24
NEDD4-202ENST00000435532 RPS4Y2Q8TD47 263 aa13.58□□□□□ -0.24
NEDD4-202ENST00000435532 RNASE6Q93091 150 aaKnown RBP13.58□□□□□ -0.24
NEDD4-202ENST00000435532 ABHD14AQ9BUJ0 271 aa13.58□□□□□ -0.24
NEDD4-202ENST00000435532 SH2D2AQ9NP31 389 aa13.58□□□□□ -0.24
NEDD4-202ENST00000435532 CTSBP07858 339 aa13.58□□□□□ -0.24
NEDD4-202ENST00000435532 OR1A1Q9P1Q5 309 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms