RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 SMPD3Q9NY59 655 aaPredicted RBP3.79□□□□□ -1.8
UBE4A-202ENST00000431736 STUB1Q9UNE7 303 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 NUP214P35658 2090 aaPredicted RBP3.79□□□□□ -1.8
UBE4A-202ENST00000431736 A6NIN4 97 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 WRBO00258 174 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 HSD17B6O14756 317 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 CALCBP10092 127 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 VHLP40337 213 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 IL24Q13007 206 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 MAPK11Q15759 364 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 MPV17LQ2QL34 196 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 SNAI3Q3KNW1 292 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 DNM1P46Q6ZS02 220 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 NR2C2APQ86WQ0 139 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 UBE2DNLQ8IWF7 75 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 BCL6BQ8N143 479 aaPredicted RBP3.79□□□□□ -1.8
UBE4A-202ENST00000431736 C10orf111Q8N326 155 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 OR13A1Q8NGR1 328 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 AQP3Q92482 292 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 KIRREL1Q96J84 757 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 SLC5A7Q9GZV3 580 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 KAAG1Q9UBP8 84 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 CENPVL3A0A0U1RRI6 287 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 MDFIC2A0A1B0GVS7 189 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 SLC16A6O15403 523 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 BCL3P20749 454 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 DEFA1P59665 94 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 DEFA3P59666 94 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 TMEM236Q5W0B7 351 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 CFHR4Q92496 578 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 TMEM68Q96MH6 324 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 FYTTD1Q96QD9 318 aaKnown RBP3.79□□□□□ -1.8
UBE4A-202ENST00000431736 DPCDQ9BVM2 203 aaPredicted RBP3.79□□□□□ -1.8
UBE4A-202ENST00000431736 FBLN5Q9UBX5 448 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 CHD3Q12873 2000 aaKnown RBP3.79□□□□□ -1.8
UBE4A-202ENST00000431736 UBE2QL1A1L167 161 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 TRIM64CA6NLI5 447 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 RBP4P02753 201 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 LYL1P12980 280 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 FUT3P21217 361 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 AESQ08117 197 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 FAM219BQ5XKK7 198 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 GLIPR1L1Q6UWM5 242 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 MSRB3Q8IXL7 192 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 UXS1Q8NBZ7 420 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 MUL1Q969V5 352 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 G6PC2Q9NQR9 355 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 ZNRD1Q9P1U0 126 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 hCG_38984A0A1B0GV85 526 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 BET1O15155 118 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 WBP4O75554 376 aaKnown RBP3.79□□□□□ -1.8
UBE4A-202ENST00000431736 ELANEP08246 267 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 OR8U9P0C7N5 309 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 AMY2BP19961 511 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 OR3A1P47881 315 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 ATP5G2Q06055 141 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 ACTBL2Q562R1 376 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 THOC7Q6I9Y2 204 aaKnown RBP3.79□□□□□ -1.8
UBE4A-202ENST00000431736 RAB12Q6IQ22 244 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 LIN54Q6MZP7 749 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 FBLIM1Q8WUP2 373 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 SNAPC3Q92966 411 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 ST6GALNAC6Q969X2 333 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 SCGB3A2Q96PL1 93 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 OR5B12Q96R08 314 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 CHST5Q9GZS9 411 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 SDHAF2Q9NX18 166 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 MRM2Q9UI43 246 aaKnown RBP3.79□□□□□ -1.8
UBE4A-202ENST00000431736 DAPK2Q9UIK4 370 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 KMT2BQ9UMN6 2715 aaPredicted RBP3.78□□□□□ -1.8
UBE4A-202ENST00000431736 LOC100506127A0A0U1RQW1 187 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 CDC42EP2O14613 210 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 OVOL1O14753 267 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 TFAP2AP05549 437 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 ZBTB25P24278 435 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 NTF4P34130 210 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 ZNF770Q6IQ21 691 aaPredicted RBP3.78□□□□□ -1.8
UBE4A-202ENST00000431736 LINC00114Q6XXX2 140 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 ZDHHC22Q8N966 263 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 PYDC1Q8WXC3 89 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 SLC35D1Q9NTN3 355 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 SLC23A1Q9UHI7 598 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 WASHC3Q9Y3C0 194 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 M0R1X1 148 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 WNT9BO14905 357 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 SYNGR1O43759 233 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 HRASP01112 189 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 CCL3L1P16619 93 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 LOXP28300 417 aaPredicted RBP3.78□□□□□ -1.8
UBE4A-202ENST00000431736 KIR2DS2P43631 304 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 TNXAQ16473 311 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 C22orf34Q6ZV56 151 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 AHSA2Q719I0 299 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 SAXO1Q8IYX7 474 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 RRNAD1Q96FB5 475 aaKnown RBP3.78□□□□□ -1.8
UBE4A-202ENST00000431736 RDH12Q96NR8 316 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 IGHV2-26A0A0B4J1V2 119 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 IGHV1-8P0DP01 117 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 OPRL1P41146 370 aa3.78□□□□□ -1.8
UBE4A-202ENST00000431736 IER3P46695 156 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms