RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 NXPH3O95157 252 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 TBX6O95947 436 aaPredicted RBP4.67□□□□□ -1.66
PTPN4-203ENST00000430976 KNG1P01042 644 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 CD33P20138 364 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 RPS20P60866 119 aaKnown RBP4.67□□□□□ -1.66
PTPN4-203ENST00000430976 SRSF3P84103 164 aaKnown RBP4.67□□□□□ -1.66
PTPN4-203ENST00000430976 TMEM241Q24JQ0 296 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 LCN15Q6UWW0 184 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 SMIM5Q71RC9 77 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 RPS27LQ71UM5 84 aaKnown RBP4.67□□□□□ -1.66
PTPN4-203ENST00000430976 SLC36A1Q7Z2H8 476 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 MOB3BQ86TA1 216 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 OR10G7Q8NGN6 311 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 OR51E1Q8TCB6 317 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 SLC37A2Q8TED4 501 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 GPR146Q96CH1 333 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 MALSU1Q96EH3 234 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 DPY30Q9C005 99 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 PRNDQ9UKY0 176 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 SPCS1Q9Y6A9 102 aa4.67□□□□□ -1.66
PTPN4-203ENST00000430976 DCCP43146 1447 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 AKAP12Q02952 1782 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 A0A087X0K7 114 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 TRGV10A0A0A0MS01 117 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 H3BUT2 72 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 SNCGO76070 127 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 PRDX3P30048 256 aaKnown RBP4.66□□□□□ -1.66
PTPN4-203ENST00000430976 NSDHLQ15738 373 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 MPV17LQ2QL34 196 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 C9orf153Q5TBE3 101 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 TMEM42Q69YG0 159 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 LYPD4Q6UWN0 246 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF550Q7Z398 422 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 D2HGDHQ8N465 521 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 OR4B1Q8NGF8 309 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 OR2K2Q8NGT1 345 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 PNPLA2Q96AD5 504 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 APOBEC3DQ96AK3 386 aaPredicted RBP4.66□□□□□ -1.66
PTPN4-203ENST00000430976 MSLNLQ96KJ4 702 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 CDX2Q99626 313 aaPredicted RBP4.66□□□□□ -1.66
PTPN4-203ENST00000430976 COA1Q9GZY4 146 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 UBIAD1Q9Y5Z9 338 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 SAMD9LQ8IVG5 1584 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 M0R082 166 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 HSPB6O14558 160 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF354AO60765 605 aaPredicted RBP4.66□□□□□ -1.66
PTPN4-203ENST00000430976 SIX3O95343 332 aaPredicted RBP4.66□□□□□ -1.66
PTPN4-203ENST00000430976 NRASP01111 189 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 CT45A8P0DMV1 189 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 CT45A9P0DMV2 189 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 ADCYAP1P18509 176 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 MTPNP58546 118 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 LTBQ06643 244 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 OR7A5Q15622 319 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 CT45A2Q5DJT8 189 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 LILRA3Q8N6C8 439 aaPredicted RBP4.66□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF784Q8NCA9 323 aaPredicted RBP4.66□□□□□ -1.66
PTPN4-203ENST00000430976 ADAD2Q8NCV1 583 aaKnown RBP4.66□□□□□ -1.66
PTPN4-203ENST00000430976 TSPAN32Q96QS1 320 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 SOSTQ9BQB4 213 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 NDC1Q9BTX1 674 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 ELL3Q9HB65 397 aaPredicted RBP4.66□□□□□ -1.66
PTPN4-203ENST00000430976 KCNIP2Q9NS61 270 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 MBD5Q9P267 1494 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 TMEM213A2RRL7 107 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 CT62P0C5K7 136 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 RPL22P35268 128 aaKnown RBP4.66□□□□□ -1.66
PTPN4-203ENST00000430976 MVDP53602 400 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 HERV-K104P61576 105 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 SHHQ15465 462 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 Q6ZRG5 221 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 MON1BQ7L1V2 547 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 BAGE3Q86Y29 109 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 BAGE2Q86Y30 109 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 C1orf159Q96HA4 380 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 PRO0628Q9UI54 55 aa4.66□□□□□ -1.66
PTPN4-203ENST00000430976 ABCC3O15438 1527 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 A0A096LPK6 155 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF732B4DXR9 585 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 EML2O95834 649 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 ZNF17P17021 662 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 PPIBP23284 216 aaKnown RBP4.65□□□□□ -1.66
PTPN4-203ENST00000430976 GALR1P47211 349 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 GRB2P62993 217 aaKnown RBP4.65□□□□□ -1.66
PTPN4-203ENST00000430976 FAM159AQ6UWV7 190 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 LINC01561Q8N1V8 128 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 KCNRGQ8N5I3 272 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 OR4K1Q8NGD4 311 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 CT55Q8WUE5 264 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 TM4SF18Q96CE8 201 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 RNF115Q9Y4L5 304 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 HES2Q9Y543 173 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 EP400Q96L91 3159 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 ZCWPW2A0A1B0GU75 182 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 TNFRSF10CO14798 259 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 LDB3O75112 727 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 FABP2P12104 132 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 TAL1P17542 331 aaPredicted RBP4.65□□□□□ -1.66
PTPN4-203ENST00000430976 MIPP30301 263 aa4.65□□□□□ -1.66
PTPN4-203ENST00000430976 GPR183P32249 361 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms