RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 PPP3CBP16298 524 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 CD200P41217 278 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 DHODHQ02127 395 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 DCAF12L2Q5VW00 463 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 NUP37Q8NFH4 326 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 OR11H4Q8NGC9 324 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 MRPL30Q8TCC3 161 aaKnown RBP12.09□□□□□ -0.47
CALD1-207ENST00000430085 TOMM40LQ969M1 308 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 TMEM230Q96A57 120 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 ELMOD3Q96FG2 381 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 DHRS9Q9BPW9 319 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 TMEM246Q9BRR3 403 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 C1orf123Q9NWV4 160 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 OR14J1Q9UGF5 321 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 SLC23A1Q9UHI7 598 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 OPN4Q9UHM6 478 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 ZSCAN5BA6NJL1 495 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 TRDCB7Z8K6 153 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 B8ZZF3 427 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 H7C1Q1 480 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 CCL21O00585 134 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 ABCD4O14678 606 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 ZNF205O95201 554 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 SFT2D2O95562 160 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 HAND1O96004 215 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 CTSDP07339 412 aaPredicted RBP12.09□□□□□ -0.47
CALD1-207ENST00000430085 ZNF728P0DKX0 622 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 FXYD4P59646 89 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 HERV-K104P61576 105 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 KCTD9Q7L273 389 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 C9orf62Q8N4C0 152 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 OR5T2Q8NGG2 359 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 OR5M8Q8NGP6 311 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 GRPEL2Q8TAA5 225 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 LIME1Q9H400 295 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 NGBQ9NPG2 151 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 DECR2Q9NUI1 292 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 TAAR3PQ9P1P4 343 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 ATP23Q9Y6H3 246 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 SHANK1Q9Y566 2161 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 TRBV6-6A0A0A6YYG2 114 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 WNT9BO14905 357 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 SPRY3O43610 288 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 RGS11O94810 467 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 TK1P04183 234 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 THBDP07204 575 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 ASCL1P50553 236 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 SLC9A3R2Q15599 337 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 SMIM21Q3B7S5 101 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 IGSF11Q5DX21 431 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 CLEC18BQ6UXF7 455 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 ACP7Q6ZNF0 438 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 PDCD10Q9BUL8 212 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 MRPL37Q9BZE1 423 aaKnown RBP12.08□□□□□ -0.48
CALD1-207ENST00000430085 TMEM165Q9HC07 324 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 TREM2Q9NZC2 230 aa12.08□□□□□ -0.48
CALD1-207ENST00000430085 DPRXA6NFQ7 191 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 G3V3Q6 166 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 BET1O15155 118 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 SCTP09683 121 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 CTXN2P0C2S0 81 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 NFYAP23511 347 aaPredicted RBP12.07□□□□□ -0.48
CALD1-207ENST00000430085 SEC61A1P61619 476 aaKnown RBP12.07□□□□□ -0.48
CALD1-207ENST00000430085 SNRPD2P62316 118 aaKnown RBP12.07□□□□□ -0.48
CALD1-207ENST00000430085 IFITM2Q01629 132 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 BSPH1Q075Z2 132 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 ABCA11PQ4W5N1 156 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 Q5BKY6 102 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 SHEQ5VZ18 495 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 LAMTOR1Q6IAA8 161 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 COQ8AQ8NI60 647 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 LRRC29Q8WV35 223 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 MRPL24Q96A35 216 aaKnown RBP12.07□□□□□ -0.48
CALD1-207ENST00000430085 MOB3AQ96BX8 217 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 OR2V2Q96R30 315 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 FXYD6Q9H0Q3 95 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 RELNP78509 3460 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 POM121CA8CG34 1229 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 FAM25EA8MYX2 175 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 DIRAS3O95661 229 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 ZNF81P51508 661 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 SUPT4H1P63272 117 aaKnown RBP12.07□□□□□ -0.48
CALD1-207ENST00000430085 LY6G6FQ5SQ64 297 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 C20orf204Q6ZNR8 217 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 MOB1BQ7L9L4 216 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 SGPP2Q8IWX5 399 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 ASCC1Q8N9N2 400 aaKnown RBP12.07□□□□□ -0.48
CALD1-207ENST00000430085 WDR89Q96FK6 387 aaPredicted RBP12.07□□□□□ -0.48
CALD1-207ENST00000430085 WFIKKN1Q96NZ8 548 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 COQ3Q9NZJ6 369 aa12.07□□□□□ -0.48
CALD1-207ENST00000430085 TEX13DA0A0J9YY54 714 aaPredicted RBP12.06□□□□□ -0.48
CALD1-207ENST00000430085 CCSO14618 274 aa12.06□□□□□ -0.48
CALD1-207ENST00000430085 PTBP3O95758 552 aaKnown RBP12.06□□□□□ -0.48
CALD1-207ENST00000430085 PPYP01298 95 aa12.06□□□□□ -0.48
CALD1-207ENST00000430085 HLA-GP17693 338 aa12.06□□□□□ -0.48
CALD1-207ENST00000430085 AADACP22760 399 aa12.06□□□□□ -0.48
CALD1-207ENST00000430085 CHRNB4P30926 498 aa12.06□□□□□ -0.48
CALD1-207ENST00000430085 CEBPDP49716 269 aaPredicted RBP12.06□□□□□ -0.48
CALD1-207ENST00000430085 TLE1Q04724 770 aa12.06□□□□□ -0.48
CALD1-207ENST00000430085 ATXN7L3Q14CW9 347 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 1290.4 ms