RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 RPP30P78346 268 aaKnown RBP11□□□□□ -0.65
CPNE4-201ENST00000429747 TBC1D28Q2M2D7 210 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 CXorf66Q5JRM2 361 aaPredicted RBP11□□□□□ -0.65
CPNE4-201ENST00000429747 C6orf15Q6UXA7 325 aaPredicted RBP11□□□□□ -0.65
CPNE4-201ENST00000429747 CYB561D1Q8N8Q1 229 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 MAP1LC3BQ9GZQ8 125 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 ZNF319Q9P2F9 582 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 DUSP13Q9UII6 198 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 R4GN57 208 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 LIFP15018 202 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 BCL3P20749 454 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 UBE2G2P60604 165 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 ACER2Q5QJU3 275 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 FAM166AQ6J272 317 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 TMEM252Q8N6L7 170 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 OR4A16Q8NH70 328 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 TMEM230Q96A57 120 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 RAB40CQ96S21 281 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 CACFD1Q9UGQ2 172 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 POLDIP2Q9Y2S7 368 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 HELZP42694 1942 aaKnown RBP11□□□□□ -0.65
CPNE4-201ENST00000429747 TERTO14746 1132 aaKnown RBP10.99□□□□□ -0.65
CPNE4-201ENST00000429747 SH2D1BO14796 132 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 MT-CO2P00403 227 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 SRD5A2P31213 254 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 ARR3P36575 388 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 GNG3P63215 75 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 ZNF92Q03936 586 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 FAM27BQ5VT28 67 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 VHLLQ6RSH7 139 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 ZNF66Q6ZN08 573 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 FAM58AQ8N1B3 248 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 OR4A4PQ8NGN8 299 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 RARRES2Q99969 163 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 OR51I2Q9H344 312 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 TUBG2Q9NRH3 451 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 TMEM38BQ9NVV0 291 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 PHF3Q92576 2039 aaKnown RBP10.99□□□□□ -0.65
CPNE4-201ENST00000429747 TRDCB7Z8K6 153 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 HLA-GP17693 338 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 MDKP21741 143 aaPredicted RBP10.99□□□□□ -0.65
CPNE4-201ENST00000429747 BMP5P22003 454 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 EDDM3BP56851 147 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 OR8G1Q15617 311 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 RNF144BQ7Z419 303 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 TDHQ8IZJ6 230 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 OR2H1Q9GZK4 316 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 SLC25A22Q9H936 323 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 PLA2G3Q9NZ20 509 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 IL24Q13007 206 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 TMEM211Q6ICI0 200 aa10.99□□□□□ -0.65
CPNE4-201ENST00000429747 NUDT16L1Q9BRJ7 211 aaKnown RBP10.99□□□□□ -0.65
CPNE4-201ENST00000429747 ACTR3CQ9C0K3 210 aaPredicted RBP10.99□□□□□ -0.65
CPNE4-201ENST00000429747 H0YL77 283 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 TOX3O15405 576 aaPredicted RBP10.98□□□□□ -0.65
CPNE4-201ENST00000429747 CST2P09228 141 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 KITLGP21583 273 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 IL11RAQ14626 422 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 PRAMEF5Q5TYX0 476 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 PRAMEF6Q5VXH4 476 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 ZNF574Q6ZN55 896 aaPredicted RBP10.98□□□□□ -0.65
CPNE4-201ENST00000429747 BIVMQ86UB2 503 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 CXorf67Q86X51 503 aaPredicted RBP10.98□□□□□ -0.65
CPNE4-201ENST00000429747 OR10S1Q8NGN2 331 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 SNX22Q96L94 193 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 Q96M66 194 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 LOC390937A0A1W2PQ73 354 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 A0A1W2PR77 199 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 NPIPB13A6NJU9 1138 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 NPIPB4C9JG80 1138 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 SOX15O60248 233 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 FGF7P21781 194 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 SNCAP37840 140 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 A0A0A6YYD4 124 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 COX5AP20674 150 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 RBM11P57052 281 aaKnown RBP10.98□□□□□ -0.65
CPNE4-201ENST00000429747 PSG4Q00888 419 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 SLC38A11Q08AI6 406 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 ZNF488Q96MN9 340 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 DMRTA2Q96SC8 542 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 ATP5SQ99766 215 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 OPA3Q9H6K4 179 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 CEACAM6P40199 344 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 FAM209BQ5JX69 171 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 NSUN5P2Q63ZY6 315 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 ZNF705AQ6ZN79 300 aaPredicted RBP10.98□□□□□ -0.65
CPNE4-201ENST00000429747 OR10V1Q8NGI7 309 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 RFESDQ8TAC1 157 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 FAM117AQ9C073 453 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 PLXNB3Q9ULL4 1909 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 PLXNA4Q9HCM2 1894 aa10.98□□□□□ -0.65
CPNE4-201ENST00000429747 CENPFP49454 3210 aa10.97□□□□□ -0.65
CPNE4-201ENST00000429747 TRBV23-1A0A0A0MS06 115 aa10.97□□□□□ -0.65
CPNE4-201ENST00000429747 IGKV1-9A0A0C4DH69 117 aa10.97□□□□□ -0.65
CPNE4-201ENST00000429747 SYNGR2O43760 224 aa10.97□□□□□ -0.65
CPNE4-201ENST00000429747 SCTP09683 121 aa10.97□□□□□ -0.65
CPNE4-201ENST00000429747 MRGPRFQ96AM1 343 aa10.97□□□□□ -0.65
CPNE4-201ENST00000429747 WNT16Q9UBV4 365 aa10.97□□□□□ -0.65
CPNE4-201ENST00000429747 LOXL2Q9Y4K0 774 aa10.97□□□□□ -0.65
CPNE4-201ENST00000429747 SEC14L6B5MCN3 397 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms