RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 PRAMEF5Q5TYX0 476 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 PRAMEF6Q5VXH4 476 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 NEGR1Q7Z3B1 354 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 ZNF761Q86XN6 746 aaPredicted RBP7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 OR1B1Q8NGR6 318 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 OR5H2Q8NGV7 314 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 OR13G1Q8NGZ3 307 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 MBD3L1Q8WWY6 194 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 MRPL24Q96A35 216 aaKnown RBP7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 ZNF681Q96N22 645 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 NMNAT3Q96T66 252 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 SAMD10Q9BYL1 202 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 CLEC1BQ9P126 229 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 FBLN5Q9UBX5 448 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 DHDHQ9UQ10 334 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 PPP1R3CQ9UQK1 317 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 TBL2Q9Y4P3 447 aaKnown RBP7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 TMEM14AQ9Y6G1 99 aa7.71□□□□□ -1.18
CDC42BPA-206ENST00000429440 CHD9Q3L8U1 2897 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 OR2T8A6NH00 312 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 H0Y8G0 127 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 SERF1AO75920 110 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 IFNA1P01562 189 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 GPX1P07203 203 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 PMCHL1Q16048 86 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 WDR38Q5JTN6 314 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 FFAR4Q5NUL3 377 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 WDR82Q6UXN9 313 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 DNAJA3Q96EY1 480 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 TSPAN32Q96QS1 320 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 PEF1Q9UBV8 284 aaKnown RBP7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 PILRBQ9UKJ0 227 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 RFNGQ9Y644 331 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 IGLON5A6NGN9 336 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 TMEM250H0YL14 139 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 VENTXO95231 258 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 C1QTNF9P0C862 333 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 ALOX5APP20292 161 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 S100GP29377 79 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 ZNF93P35789 620 aaPredicted RBP7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 KRTDAPP60985 99 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 PSG9Q00887 426 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 ZNF154Q13106 437 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 CD226Q15762 336 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 RNFT1Q5M7Z0 435 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 C1QL3Q5VWW1 255 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 ASTLQ6HA08 431 aaPredicted RBP7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 CMTM8Q8IZV2 173 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 OR2C3Q8N628 320 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 ST6GALNAC3Q8NDV1 305 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 SIGLEC12Q96PQ1 595 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 ZNF160Q9HCG1 818 aa7.7□□□□□ -1.18
CDC42BPA-206ENST00000429440 NOTCH4Q99466 2003 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 SCN2AQ99250 2005 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 A0A0U1RQK1 487 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 DCDC2BA2VCK2 349 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 ZFP92A6NM28 416 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 SIRPB1O00241 398 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 CD5LO43866 347 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 LINC00271P0C7V0 271 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 DUSP1P28562 367 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 TIMP3P35625 211 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 GRK6P43250 576 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 TAS2R46P59540 309 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 RAB31Q13636 194 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 GNMTQ14749 295 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 HNRNPA1L2Q32P51 320 aaKnown RBP7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 LRTM2Q8N967 370 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 ZNF740Q8NDX6 193 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 NKD1Q969G9 470 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 GPR27Q9NS67 375 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 TAS2R4Q9NYW5 299 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 DPRXA6NFQ7 191 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 CRYM-AS1A6NIL9 109 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 LRRC3CA6NJW4 275 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 HIDE1A8MVS5 230 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 TNFRSF10CO14798 259 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 XRCC2O43543 280 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 TSPAN13O95857 204 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 CRISP2P16562 243 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 ADMP35318 185 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 LHX2P50458 406 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 QRFPP83859 136 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 CLEC12BQ2HXU8 276 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 ALG10Q5BKT4 473 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 UFSP1Q6NVU6 142 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 CALHM1Q8IU99 346 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 NUP43Q8NFH3 380 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 CADM4Q8NFZ8 388 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 SFRP2Q96HF1 295 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 C11orf1Q9H5F2 150 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 WDR76Q9H967 626 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 CHODLQ9H9P2 273 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 ZNF780BQ9Y6R6 833 aa7.69□□□□□ -1.18
CDC42BPA-206ENST00000429440 PLXNA2O75051 1894 aa7.68□□□□□ -1.18
CDC42BPA-206ENST00000429440 SAA2-SAA4A0A096LPE2 208 aa7.68□□□□□ -1.18
CDC42BPA-206ENST00000429440 LDB3O75112 727 aa7.68□□□□□ -1.18
CDC42BPA-206ENST00000429440 HPNP05981 417 aa7.68□□□□□ -1.18
CDC42BPA-206ENST00000429440 CKMP06732 381 aa7.68□□□□□ -1.18
CDC42BPA-206ENST00000429440 H2BFMP0C1H6 154 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms