RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 CTSZQ9UBR2 303 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 SLC25A10Q9UBX3 287 aaPredicted RBP6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 CLN8Q9UBY8 286 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 MIOXQ9UGB7 285 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 AK3Q9UIJ7 227 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 RABL2BQ9UNT1 228 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 MAB21L2Q9Y586 359 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 USF3Q68DE3 2245 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 SPG11Q96JI7 2443 aa6.59□□□□□ -1.35
HMGA1P4-201ENST00000428643 TACC2O95359 2948 aa6.59□□□□□ -1.36
HMGA1P4-201ENST00000428643 ARFGEF3Q5TH69 2177 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 MEIKINA0A087WXM9 373 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 IGHV4-61A0A0C4DH41 118 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 MEIS3P1A6NDR6 274 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 VWC2LB2RUY7 222 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 H7C1Q1 480 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 IGHV2-5P01817 119 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 HLA-DQB1P01920 261 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 CSN2P05814 226 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 LPLP06858 475 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 LMO1P25800 156 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 PRSS3P35030 304 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 ETV6P41212 452 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 GLP1RP43220 463 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 P2RX3P56373 397 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 TMEM50BP56557 158 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 GNB2P62879 340 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 MRPS10P82664 201 aaKnown RBP6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 ZNF45Q02386 682 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 AESQ08117 197 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 LSAMPQ13449 338 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 ZNF846Q147U1 533 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 ZNF79Q15937 498 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 PNLIPRP3Q17RR3 467 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 ZNF260Q3ZCT1 412 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 KRBOX4Q5JUW0 171 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 FGFRL1Q8N441 504 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 OR5D13Q8NGL4 314 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 CLDND2Q8NHS1 167 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 PLPPR1Q8TBJ4 325 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 SMIM4Q8WVI0 70 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 RAB39BQ96DA2 213 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 COQ2Q96H96 371 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 SNX22Q96L94 193 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 Q96MF0 132 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 ABHD1Q96SE0 405 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 SCPEP1Q9HB40 452 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 PATZ1Q9HBE1 687 aaKnown RBP6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 IFT46Q9NQC8 304 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 KAAG1Q9UBP8 84 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 KIF25Q9UIL4 384 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 ELF5Q9UKW6 265 aaPredicted RBP6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 KCNK7Q9Y2U2 307 aa6.58□□□□□ -1.36
HMGA1P4-201ENST00000428643 APCP25054 2843 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 TRGV10A0A0A0MS01 117 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 TRAV39A0A0B4J263 110 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 A0A1W2PQ09 198 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 ODAMA1E959 279 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 MEX3AA1L020 520 aaKnown RBP6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 MEIOCA2RUB1 952 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 FUOMA2VDF0 154 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 F5H0A9 414 aaPredicted RBP6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 GABARAPH6UMI1 98 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 TNFRSF13BO14836 293 aaPredicted RBP6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 PHF1O43189 567 aaPredicted RBP6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 SSX5O60225 188 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 CA11O75493 328 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 TPPPO94811 219 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 FCER2P06734 321 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 WNT2P09544 360 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 USF1P22415 310 aaPredicted RBP6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 PTBP1P26599 531 aaKnown RBP eCLIP6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 GLIPR1P48060 266 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 INPP1P49441 399 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 ACTBP60709 375 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 SEC61A1P61619 476 aaKnown RBP6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 ACTG1P63261 375 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 DGCR2P98153 550 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 RSBN1Q5VWQ0 802 aaPredicted RBP6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 SHEQ5VZ18 495 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 TRIQKQ629K1 86 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 ZNF497Q6ZNH5 498 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 DNM1P46Q6ZS02 220 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 MOB1BQ7L9L4 216 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 FAM185AQ8N0U4 392 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 Q8N402 240 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 TPRX1Q8N7U7 411 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 OR4K15Q8NH41 348 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 OR52I2Q8NH67 350 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 MRPL30Q8TCC3 161 aaKnown RBP6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 CCDC107Q8WV48 283 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 FCAMRQ8WWV6 532 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 FOXC2Q99958 501 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 SSBP3Q9BWW4 388 aaPredicted RBP6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 SRRQ9GZT4 340 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 SHARPINQ9H0F6 387 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 RIMS4Q9H426 269 aaPredicted RBP6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 ITGB1BP2Q9UKP3 347 aa6.57□□□□□ -1.36
HMGA1P4-201ENST00000428643 TRAPPC2LQ9UL33 140 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms