RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 SSUH2Q9Y2M2 353 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 TLN1Q9Y490 2541 aaKnown RBP8.83□□□□□ -1
HDAC9-210ENST00000428307 SPTA1P02549 2419 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 RPS10-NUDT3A0A1W2PQS6 291 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 RNF222A6NCQ9 220 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 A6NLC8 198 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 POM121CA8CG34 1229 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 H0YIZ8 118 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 WNT9BO14905 357 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 TPD52L2O43399 206 aaKnown RBP8.83□□□□□ -1
HDAC9-210ENST00000428307 OR2H2O95918 312 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 CEBPDP49716 269 aaPredicted RBP8.83□□□□□ -1
HDAC9-210ENST00000428307 ERVK11-1P61568 191 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 PRAMEF6Q5VXH4 476 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 Q6P435 159 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 PRR18Q8N4B5 295 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 Q8NA96 180 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 INO80EQ8NBZ0 244 aaPredicted RBP8.83□□□□□ -1
HDAC9-210ENST00000428307 MRPL30Q8TCC3 161 aaKnown RBP8.83□□□□□ -1
HDAC9-210ENST00000428307 SECTM1Q8WVN6 248 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 GPHA2Q96T91 129 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 DHRS9Q9BPW9 319 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 NRIP2Q9BQI9 281 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 ATP23Q9Y6H3 246 aa8.83□□□□□ -1
HDAC9-210ENST00000428307 ADGRG4Q8IZF6 3080 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 IGKV1-6A0A0C4DH72 117 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 TRDCB7Z8K6 153 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 PGA5P0DJD9 388 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 NAAAQ02083 359 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 RAB32Q13637 225 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 RBM39Q14498 530 aaKnown RBP8.82□□□□□ -1
HDAC9-210ENST00000428307 IL13RA2Q14627 380 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 IAH1Q2TAA2 248 aaPredicted RBP8.82□□□□□ -1
HDAC9-210ENST00000428307 PAN3Q58A45 887 aaKnown RBP8.82□□□□□ -1
HDAC9-210ENST00000428307 SPIN3Q5JUX0 258 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 VHLLQ6RSH7 139 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 ACOT7LQ6ZUV0 252 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 C22orf34Q6ZV56 151 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 LINC00596Q86U02 117 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 LRP11Q86VZ4 500 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 DOLPP1Q86YN1 238 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 UBALD1Q8TB05 177 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 IL1F10Q8WWZ1 152 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 DCUN1D4Q92564 292 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 MUCL1Q96DR8 90 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 NAA60Q9H7X0 242 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 AMDHD2Q9Y303 409 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 PTPRQQ9UMZ3 2332 aa8.82□□□□□ -1
HDAC9-210ENST00000428307 SMG1Q96Q15 3661 aaKnown RBP8.82□□□□□ -1
HDAC9-210ENST00000428307 A0A0D9SG52 128 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 KIR2DS1A0A191URI9 304 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 K7ENP7 123 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 FAM87AP0C7U9 286 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 GNRHRP30968 328 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 KIR2DS4P43632 304 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 S100A10P60903 97 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 KIR2DS1Q14954 304 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 TIMM23BQ5SRD1 257 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 ZNF324BQ6AW86 544 aaPredicted RBP8.81□□□□□ -1
HDAC9-210ENST00000428307 C11orf53Q8IXP5 236 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 Q8IYB0 196 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 SLC38A6Q8IZM9 456 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 KCNRGQ8N5I3 272 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 MRPL24Q96A35 216 aaKnown RBP8.81□□□□□ -1
HDAC9-210ENST00000428307 PIK3IP1Q96FE7 263 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 C2orf50Q96LR7 162 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 RASL12Q9NYN1 266 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 OR5AC2Q9NZP5 309 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 HEATR1Q9H583 2144 aaKnown RBP8.81□□□□□ -1
HDAC9-210ENST00000428307 ZZEF1O43149 2961 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.81□□□□□ -1
HDAC9-210ENST00000428307 KANTRA0A1W2PQU2 76 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 hCG_1807616A0A1W2PRN6 198 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 LEUTXA8MZ59 168 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 SLC33A1O00400 549 aaPredicted RBP8.81□□□□□ -1
HDAC9-210ENST00000428307 PRRG2O14669 202 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 PHF1O43189 567 aaPredicted RBP8.81□□□□□ -1
HDAC9-210ENST00000428307 OR2F2O95006 317 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 DIRAS3O95661 229 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 RLN2P04090 185 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 TFF1P04155 84 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 CEACAM8P31997 349 aaPredicted RBP8.81□□□□□ -1
HDAC9-210ENST00000428307 OR2F1Q13607 317 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 MSMPQ1L6U9 139 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 PRR30Q53SZ7 412 aaPredicted RBP8.81□□□□□ -1
HDAC9-210ENST00000428307 CLLU1Q5K131 121 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 GGNBP1Q5YKI7 109 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 Q6ZS49 121 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 LYZL2Q7Z4W2 148 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 SLC51BQ86UW2 128 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 PLPPR1Q8TBJ4 325 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 GLYATL2Q8WU03 294 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 RRNAD1Q96FB5 475 aaKnown RBP8.81□□□□□ -1
HDAC9-210ENST00000428307 SYT3Q9BQG1 590 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 ZNF471Q9BX82 626 aaPredicted RBP8.81□□□□□ -1
HDAC9-210ENST00000428307 RIMS4Q9H426 269 aaPredicted RBP8.81□□□□□ -1
HDAC9-210ENST00000428307 ICE1Q9Y2F5 2266 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 PCNX1Q96RV3 2341 aa8.81□□□□□ -1
HDAC9-210ENST00000428307 IGKV1D-13A0A0B4J2D9 117 aa8.8□□□□□ -1
HDAC9-210ENST00000428307 A8MXE2 369 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms