RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 ECSCRQ19T08 205 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 CLVS2Q5SYC1 327 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 LCN1P1Q5VSP4 162 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 TMEM42Q69YG0 159 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 CYP4Z1Q86W10 505 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 MS4A10Q96PG2 267 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 NMNAT2Q9BZQ4 307 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 MED20Q9H944 212 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 PLEKHA1Q9HB21 404 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 SLC25A19Q9HC21 320 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 COPS3Q9UNS2 423 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 KLHDC2Q9Y2U9 406 aa6.87□□□□□ -1.31
LSG1-202ENST00000427461 IGHV7-81A0A0B4J1V7 117 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 MSGN1A6NI15 193 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 ZNF785A8K8V0 405 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 FAM220BPB1ANY3 271 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 ENTPD6O75354 484 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 OR2H2O95918 312 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 LYNP07948 512 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 CGB3P0DN86 165 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 CGB7P0DN87 165 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 ATP6V1B1P15313 513 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 H2AFXP16104 143 aaPredicted RBP6.86□□□□□ -1.31
LSG1-202ENST00000427461 BCL3P20749 454 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 CD1BP29016 333 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 GSTT1P30711 240 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 SYNJ2BPP57105 145 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 BNIP1Q12981 228 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 DYRK1AQ13627 763 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 KLF5Q13887 457 aaPredicted RBP6.86□□□□□ -1.31
LSG1-202ENST00000427461 C19orf54Q5BKX5 351 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 KRBOX4Q5JUW0 171 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 SLC25A26Q70HW3 274 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 WFDC3Q8IUB2 231 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 GVQW1Q8N7I0 195 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 OR2T12Q8NG77 320 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 OR8J3Q8NGG0 315 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 OR8D4Q8NGM9 314 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 RFESDQ8TAC1 157 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 RHOVQ96L33 236 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 SPACA5Q96QH8 159 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 MBOAT4Q96T53 435 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 OSBPL10Q9BXB5 764 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 SEBOXQ9HB31 216 aaPredicted RBP6.86□□□□□ -1.31
LSG1-202ENST00000427461 FAM206AQ9NX38 181 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 SLC2A8Q9NY64 477 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 IDI2-AS1Q9NZ38 188 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 NDUFAF4Q9P032 175 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 SLC23A1Q9UHI7 598 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 MYRFQ9Y2G1 1151 aa6.86□□□□□ -1.31
LSG1-202ENST00000427461 FUOMA2VDF0 154 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 ANKRD34BA5PLL1 514 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 SELENOFO60613 162 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 DHRS3O75911 302 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 PRKACAP17612 351 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 GLP1RP43220 463 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 GSSP48637 474 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 MECP2P51608 486 aaKnown RBP6.85□□□□□ -1.31
LSG1-202ENST00000427461 NANOS2P60321 138 aaKnown RBP6.85□□□□□ -1.31
LSG1-202ENST00000427461 NDPQ00604 133 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 ATXN7L3Q14CW9 347 aaPredicted RBP6.85□□□□□ -1.31
LSG1-202ENST00000427461 ZNF146Q15072 292 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 SHFQ7M4L6 423 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 FAM58AQ8N1B3 248 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 YIPF7Q8N8F6 280 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 OR8H1Q8NGG4 311 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 OR13A1Q8NGR1 328 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 RTN4IP1Q8WWV3 396 aaPredicted RBP6.85□□□□□ -1.31
LSG1-202ENST00000427461 RITA1Q96K30 269 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 SH3GL1Q99961 368 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 TMEM109Q9BVC6 243 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 GGTLC1Q9BX51 225 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 PBOV1Q9GZY1 135 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 CALYQ9NYX4 217 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 FBXL17Q9UF56 701 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 MRM2Q9UI43 246 aaKnown RBP6.85□□□□□ -1.31
LSG1-202ENST00000427461 APLNQ9ULZ1 77 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 A3GALT2U3KPV4 340 aa6.85□□□□□ -1.31
LSG1-202ENST00000427461 TMEM269A0A1B0GVZ9 245 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 TMEM120BA0PK00 339 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 SPRY2O43597 315 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 ATF4P18848 351 aaPredicted RBP6.84□□□□□ -1.31
LSG1-202ENST00000427461 HTR1FP30939 366 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 BMI1P35226 326 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 HCCSP53701 268 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 TPPP2P59282 170 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 CDC42P60953 191 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 SCN1BQ07699 218 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 MMDQ15546 238 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 LRRC36Q1X8D7 754 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 DEFB135Q30KP9 77 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 CD300EQ496F6 205 aaPredicted RBP6.84□□□□□ -1.31
LSG1-202ENST00000427461 TNFAIP8L3Q5GJ75 292 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 ENTHD1Q8IYW4 607 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 OTOSQ8NHW6 89 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 DHRS1Q96LJ7 313 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 ANKRD60Q9BZ19 345 aa6.84□□□□□ -1.31
LSG1-202ENST00000427461 RANGRFQ9HD47 186 aaPredicted RBP6.84□□□□□ -1.31
LSG1-202ENST00000427461 EXOSC4Q9NPD3 245 aaKnown RBP6.84□□□□□ -1.31
LSG1-202ENST00000427461 FOXA2Q9Y261 457 aaPredicted RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms