RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 FAM90A8PA6NJQ4 464 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 POM121CA8CG34 1229 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 H3BUX3 64 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 IGHV1-8P0DP01 117 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 SRMP19623 302 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 LMO1P25800 156 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 CALRP27797 417 aaKnown RBP10.32□□□□□ -0.76
GPC1-204ENST00000426280 PTGFRP43088 359 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 AESQ08117 197 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 PLA1AQ53H76 456 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 C22orf42Q6IC83 251 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 CD200R1LQ6Q8B3 271 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 SHISA2Q6UWI4 295 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 GDPD3Q7L5L3 318 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 SAXO1Q8IYX7 474 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 ZSCAN4Q8NAM6 433 aaPredicted RBP10.32□□□□□ -0.76
GPC1-204ENST00000426280 PXT1Q8NFP0 134 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 OR4D6Q8NGJ1 314 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 GFI1Q99684 422 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 OR51E2Q9H255 320 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 PPA2Q9H2U2 334 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 DPAGT1Q9H3H5 408 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 HEXA-AS1Q9H8Q6 139 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 EXOSC4Q9NPD3 245 aaKnown RBP10.32□□□□□ -0.76
GPC1-204ENST00000426280 ING3Q9NXR8 418 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 VPREB3Q9UKI3 123 aa10.32□□□□□ -0.76
GPC1-204ENST00000426280 AK6Q9Y3D8 172 aaKnown RBP10.32□□□□□ -0.76
GPC1-204ENST00000426280 CLPSL1A2RUU4 121 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 ODF3BA8MYP8 253 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 SLC33A1O00400 549 aaPredicted RBP10.31□□□□□ -0.76
GPC1-204ENST00000426280 CHST1O43916 411 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 HTR3BO95264 441 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 PAHP00439 452 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 CRYBA1P05813 215 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 CD36P16671 472 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 GADD45AP24522 165 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 MIDNQ504T8 468 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 FBLN7Q53RD9 439 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 OLFML2AQ68BL7 652 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 SLC35E4Q6ICL7 350 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 CCBE1Q6UXH8 406 aaPredicted RBP10.31□□□□□ -0.76
GPC1-204ENST00000426280 ASCL4Q6XD76 172 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 Q8IYB0 196 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 WFDC12Q8WWY7 111 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 PHYHIPQ92561 330 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 RNF167Q9H6Y7 350 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 STUB1Q9UNE7 303 aa10.31□□□□□ -0.76
GPC1-204ENST00000426280 MRPS28Q9Y2Q9 187 aaKnown RBP10.31□□□□□ -0.76
GPC1-204ENST00000426280 TRAV39A0A0B4J263 110 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 TRAV24A0A0B4J272 114 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 SMIM30A4D0T7 59 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 FAM172BPA6NC97 362 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 SH2D1BO14796 132 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 MGST3O14880 152 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 ARL6IP5O75915 188 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 ARG1P05089 322 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 SERPINA2P20848 420 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 P2RX3P56373 397 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 PROK1P58294 105 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 MEF2CQ06413 473 aaPredicted RBP10.3□□□□□ -0.76
GPC1-204ENST00000426280 RSU1Q15404 277 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 C17orf58Q2M2W7 97 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 PIGYQ3MUY2 71 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 SLC22A6Q4U2R8 563 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 SPIN3Q5JUX0 258 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 PRAMEF5Q5TYX0 476 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 GLIPR1L1Q6UWM5 242 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 NKAIN3Q8N8D7 197 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 OR11H6Q8NGC7 330 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 OR4F5Q8NH21 305 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 CPNE2Q96FN4 548 aaPredicted RBP10.3□□□□□ -0.76
GPC1-204ENST00000426280 ZNF714Q96N38 554 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 CHCHD6Q9BRQ6 235 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 SLITRK2Q9H156 845 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 KCNK15Q9H427 330 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 BEX1Q9HBH7 125 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 VCX3AQ9NNX9 186 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 TXNL4BQ9NX01 149 aaKnown RBP10.3□□□□□ -0.76
GPC1-204ENST00000426280 RNF114Q9Y508 228 aa10.3□□□□□ -0.76
GPC1-204ENST00000426280 hADV38S2A0JD32 116 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 HSPB6O14558 160 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 DEGS1O15121 323 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 TSPAN9O75954 239 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 CGB3P0DN86 165 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 CGB7P0DN87 165 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 ZNF44P15621 663 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 ERP29P30040 261 aaKnown RBP10.29□□□□□ -0.76
GPC1-204ENST00000426280 OR10A3P58181 314 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 PRR31Q5SQ13 230 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 ZNF626Q68DY1 528 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 AWAT2Q6E213 333 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 ELP2Q6IA86 826 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 BRICD5Q6PL45 260 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 Q6ZS46 218 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 Q8NFD4 153 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 SGMS2Q8NHU3 365 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 PLPPR1Q8TBJ4 325 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 YIPF6Q96EC8 236 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 CITED1Q99966 193 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 METTL9Q9H1A3 318 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms