RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 HSPB6O14558 160 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 CYTIPO60759 359 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 PDCD6O75340 191 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 DEDDO75618 318 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 WISP2O76076 250 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 PTAFRP25105 342 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 GLP1RP43220 463 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 PJVKQ0ZLH3 352 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 RIPPLY2Q5TAB7 128 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 EIF5AL1Q6IS14 154 aaKnown RBP9.18□□□□□ -0.94
CUX1-205ENST00000425244 HAGHLQ6PII5 290 aaPredicted RBP9.18□□□□□ -0.94
CUX1-205ENST00000425244 LDLRAD3Q86YD5 345 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 SPACA3Q8IXA5 215 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 OR56B2PQ8NGI1 322 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 RHOFQ9HBH0 211 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 BIN3Q9NQY0 253 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 SLC7A10Q9NS82 523 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 PTPRQQ9UMZ3 2332 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 C5orf49A4QMS7 147 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 H7C2Y5 167 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 K7EM74 188 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 TAAR5O14804 337 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 PHF1O43189 567 aaPredicted RBP9.18□□□□□ -0.94
CUX1-205ENST00000425244 MUC1P15941 1255 aaPredicted RBP9.18□□□□□ -0.94
CUX1-205ENST00000425244 GFRA1P56159 465 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 RBM11P57052 281 aaKnown RBP9.18□□□□□ -0.94
CUX1-205ENST00000425244 HERV-K104P61576 105 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 SLC10A1Q14973 349 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 SWI5Q1ZZU3 235 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 C5orf24Q7Z6I8 188 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 SLAMF9Q96A28 289 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 MLXQ9UH92 298 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 TPRP12270 2363 aaKnown RBP9.18□□□□□ -0.94
CUX1-205ENST00000425244 WRBO00258 174 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 MBPP02686 304 aaPredicted RBP9.18□□□□□ -0.94
CUX1-205ENST00000425244 MMP7P09237 267 aaPredicted RBP9.18□□□□□ -0.94
CUX1-205ENST00000425244 AADACP22760 399 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 FOXG1P55316 489 aaPredicted RBP9.18□□□□□ -0.94
CUX1-205ENST00000425244 TMEM187Q14656 261 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 OR8B8Q15620 311 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 KRTAP27-1Q3LI81 207 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 DHRS11Q6UWP2 260 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 ASCL4Q6XD76 172 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 TUSC5Q8IXB3 177 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 ERGIC1Q969X5 290 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 BSCL2Q96G97 398 aaPredicted RBP9.18□□□□□ -0.94
CUX1-205ENST00000425244 UQCC1Q9NVA1 299 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 ZNF391Q9UJN7 358 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 WASF3Q9UPY6 502 aa9.18□□□□□ -0.94
CUX1-205ENST00000425244 CST4P01036 141 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 ACAA1P09110 424 aaPredicted RBP9.17□□□□□ -0.94
CUX1-205ENST00000425244 SMIM6P0DI80 62 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 GPM6AP51674 278 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 AKIRIN2Q53H80 203 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 IL34Q6ZMJ4 242 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 PRRG4Q9BZD6 226 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 CRIM1Q9NZV1 1036 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 TUBD1Q9UJT1 453 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 MSRB2Q9Y3D2 182 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 IFNA4P05014 189 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 H2AFB1P0C5Y9 115 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 FUT3P21217 361 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 Q6ZPA2 131 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 Q6ZRG5 221 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 ZNF100Q8IYN0 542 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 SPAG16Q8N0X2 631 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 ZFP62Q8NB50 900 aaPredicted RBP9.17□□□□□ -0.94
CUX1-205ENST00000425244 NEK7Q8TDX7 302 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 EDARADDQ8WWZ3 215 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 GTF3AQ92664 365 aaKnown RBP9.17□□□□□ -0.94
CUX1-205ENST00000425244 EXTL1Q92935 676 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 OR51B6Q9H340 312 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 DECR2Q9NUI1 292 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 NDRG3Q9UGV2 375 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 PURGQ9UJV8 347 aaKnown RBP9.17□□□□□ -0.94
CUX1-205ENST00000425244 LHX6Q9UPM6 363 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 AMDHD2Q9Y303 409 aa9.17□□□□□ -0.94
CUX1-205ENST00000425244 EIF3GO75821 320 aaKnown RBP eCLIP9.16□□□□□ -0.94
CUX1-205ENST00000425244 IGHV2-70P01814 119 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 BCL3P20749 454 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 S100PP25815 95 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 DUSP1P28562 367 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 NPBWR1P48145 328 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 SPIN3Q5JUX0 258 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 LIAT1Q6ZQX7 453 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 MRPL21Q7Z2W9 205 aaKnown RBP9.16□□□□□ -0.94
CUX1-205ENST00000425244 OR52M1Q8NGK5 317 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 SMIM8Q96KF7 97 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 OR51M1Q9H341 326 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 RAXQ9Y2V3 346 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 STARD10Q9Y365 291 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 NUDT19A8MXV4 375 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 JTBO76095 146 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 SYNGR4O95473 234 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 CD80P33681 288 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 LHX2P50458 406 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 CAV2P51636 162 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 PRDX4Q13162 271 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 FBXW12Q6X9E4 464 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 ZADH2Q8N4Q0 377 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms