RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ZNF57Q68EA5 555 aaPredicted RBP11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 MOB1BQ7L9L4 216 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 RTN4RL2Q86UN3 420 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 CD177Q8N6Q3 437 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 POC5Q8NA72 575 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 VRK1Q99986 396 aaPredicted RBP11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 C11orf54Q9H0W9 315 aaPredicted RBP11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 UBTD1Q9HAC8 227 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 SLC2A8Q9NY64 477 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 OPN4Q9UHM6 478 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 POLQO75417 2590 aa11.92□□□□□ -0.5
SHMT1P1-201ENST00000419974 ZNF736B4DX44 427 aaPredicted RBP11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 MGST3O14880 152 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 SIGLEC5O15389 551 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 AMY2BP19961 511 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 RFX2P48378 723 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 TAS2R46P59540 309 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 C11orf91Q3C1V1 193 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 PAN3Q58A45 887 aaKnown RBP11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 RSBN1Q5VWQ0 802 aaPredicted RBP11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 STEAP1BQ6NZ63 245 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 CCL17Q92583 94 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 SNAPC3Q92966 411 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 MED30Q96HR3 178 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 ZNF665Q9H7R5 613 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 CHODLQ9H9P2 273 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 HRASLSQ9HDD0 168 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 Q9N2K0 584 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 IFT46Q9NQC8 304 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 ZNF701Q9NV72 531 aaPredicted RBP11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 ETAA1Q9NY74 926 aa11.91□□□□□ -0.5
SHMT1P1-201ENST00000419974 KIR2DS1A0A191URI9 304 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 TMEM82A0PJX8 343 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 MT-ND4P03905 459 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 BTCP35070 178 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 KIR2DS4P43632 304 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 OR3A1P47881 315 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 SNU13P55769 128 aaKnown RBP11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 KRTAP10-9P60411 292 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 BTG1P62324 171 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 COL10A1Q03692 680 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 KIR2DS1Q14954 304 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 PDCD1Q15116 288 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 GRK1Q15835 563 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 TMEM155Q4W5P6 130 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 GDPD3Q7L5L3 318 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 OVCH2Q7RTZ1 564 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 BATF2Q8N1L9 274 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 ARRDC1Q8N5I2 433 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 GVQW1Q8N7I0 195 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 BEST4Q8NFU0 473 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 OR5AP2Q8NGF4 316 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 MRPL30Q8TCC3 161 aaKnown RBP11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 ANXA10Q9UJ72 324 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 MAB21L2Q9Y586 359 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 CCDC168Q8NDH2 2452 aa11.9□□□□□ -0.5
SHMT1P1-201ENST00000419974 TANC2Q9HCD6 1990 aa11.9□□□□□ -0.51
SHMT1P1-201ENST00000419974 UBE2QL1A1L167 161 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 FUOMA2VDF0 154 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 CEACAM18A8MTB9 384 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 GPR37O15354 613 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 IGHV2-70P01814 119 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 TK1P04183 234 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 CD3DP04234 171 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 CTXN2P0C2S0 81 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 DAOP14920 347 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 COL8A2P25067 703 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 RAG2P55895 527 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 PLA1AQ53H76 456 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 TRAT1Q6PIZ9 186 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 Q6ZPA2 131 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 DCDC5Q6ZRR9 648 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 PEG10Q86TG7 708 aaKnown RBP11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 TGIF2LYQ8IUE0 185 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 MUC20Q8N307 709 aaPredicted RBP11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 GAFA1Q96PS6 74 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR14J1Q9UGF5 321 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 AKAP9Q99996 3911 aa11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 ANKRD17O75179 2603 aaKnown RBP11.89□□□□□ -0.51
SHMT1P1-201ENST00000419974 SPG11Q96JI7 2443 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 TMEM30CPA0ZSE6 113 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 NPIPB11E5RHQ5 1161 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 C3orf80F5H4A9 247 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 SIRPB1O00241 398 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 RAB3DO95716 219 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 ZNF735P0CB33 412 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 CD80P33681 288 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 IL13RA1P78552 427 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 RNASE10Q5GAN6 216 aaKnown RBP11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 BRICD5Q6PL45 260 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 DHRS11Q6UWP2 260 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 Q6ZNX1 250 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 SLC36A1Q7Z2H8 476 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 NRARPQ7Z6K4 114 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 BPIFB2Q8N4F0 458 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR4S1Q8NGB4 309 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR4C16Q8NGL9 310 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR4K15Q8NH41 348 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 DYRK2Q92630 601 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 SLC25A21Q9BQT8 299 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms