RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 Q6ZS92 163 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 STPG2Q8N412 459 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 CNEP1R1Q8N9A8 125 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 LILRB1Q8NHL6 650 aaPredicted RBP12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 MSI2Q96DH6 328 aaKnown RBP12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 C18orf12Q96KH6 178 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 TMEM56Q96MV1 263 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 REG4Q9BYZ8 158 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 LIME1Q9H400 295 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 PROCRQ9UNN8 238 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 TMEM56-RWDD3S4R434 201 aa12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 EP300Q09472 2414 aaPredicted RBP12.41□□□□□ -0.42
HLA-DPA1-242ENST00000419277 RAB19A4D1S5 217 aa12.4□□□□□ -0.42
HLA-DPA1-242ENST00000419277 TEX46H3BTG2 121 aa12.4□□□□□ -0.42
HLA-DPA1-242ENST00000419277 K7EPK0 472 aa12.4□□□□□ -0.42
HLA-DPA1-242ENST00000419277 MPPED1O15442 326 aa12.4□□□□□ -0.42
HLA-DPA1-242ENST00000419277 KITLGP21583 273 aa12.4□□□□□ -0.42
HLA-DPA1-242ENST00000419277 S100A10P60903 97 aa12.4□□□□□ -0.42
HLA-DPA1-242ENST00000419277 GCNT2Q8N0V5 402 aa12.4□□□□□ -0.42
HLA-DPA1-242ENST00000419277 BVESQ8NE79 360 aa12.4□□□□□ -0.42
HLA-DPA1-242ENST00000419277 NRIP2Q9BQI9 281 aa12.4□□□□□ -0.42
HLA-DPA1-242ENST00000419277 OR2J1Q9GZK6 312 aa12.4□□□□□ -0.42
HLA-DPA1-242ENST00000419277 TMEM222Q9H0R3 208 aa12.4□□□□□ -0.42
HLA-DPA1-242ENST00000419277 ZNF581Q9P0T4 197 aa12.4□□□□□ -0.42
HLA-DPA1-242ENST00000419277 C3orf85A0A1B0GTC6 90 aa12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 FGF16O43320 207 aa12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 LYZL6O75951 148 aa12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 CRYZL1O95825 349 aa12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 WT1P19544 449 aaPredicted RBP12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 C9orf106Q8NAJ2 232 aa12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 PRSS33Q8NF86 280 aa12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 OR1J1Q8NGS3 322 aa12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 MRPL30Q8TCC3 161 aaKnown RBP12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 GLYATL2Q8WU03 294 aa12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 FAM216AQ8WUB2 273 aa12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 DYRK2Q92630 601 aa12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SAT2Q96F10 170 aaPredicted RBP12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SLC5A7Q9GZV3 580 aa12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TMEM100Q9NV29 134 aa12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 GSKIPQ9P0R6 139 aa12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ZNF629Q9UEG4 869 aaPredicted RBP12.4□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SHANK1Q9Y566 2161 aa12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 A0A1B0GWJ7 208 aa12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 B8ZZF3 427 aa12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SH2D1BO14796 132 aa12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 OR8G1Q15617 311 aa12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 KRTCAP3Q53RY4 240 aa12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 MBNL2Q5VZF2 373 aaKnown RBP12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ZNF585AQ6P3V2 769 aa12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SSX8Q7RTT4 187 aa12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 OR8G5Q8NG78 346 aa12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 OR10J5Q8NHC4 309 aa12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SLC25A40Q8TBP6 338 aa12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 USB1Q9BQ65 265 aaKnown RBP12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TLNRD1Q9H1K6 362 aa12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 DLL3Q9NYJ7 618 aa12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 OR5AC2Q9NZP5 309 aa12.39□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TRAV24A0A0B4J272 114 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 FAM221AA4D161 298 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 CLEC18AA5D8T8 446 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 OR5H1A6NKK0 313 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 MPTX1A8MV57 137 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 H0Y980 276 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ST8SIA3O43173 380 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 PHF1O43189 567 aaPredicted RBP12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SLC25A6P12236 298 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 P2RY1P47900 373 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ZNF718Q3SXZ3 478 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 Q6ZPA2 131 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SCCPDHQ8NBX0 429 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 CLEC18CQ8NCF0 446 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 KLF14Q8TD94 323 aaPredicted RBP12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 RRNAD1Q96FB5 475 aaKnown RBP12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 AKR1E2Q96JD6 320 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 CXorf58Q96LI9 332 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 BARX1Q9HBU1 254 aaPredicted RBP12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 HES4Q9HCC6 221 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 CRIM1Q9NZV1 1036 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 OR2W1Q9Y3N9 320 aa12.38□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TNFSF13O75888 250 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 MMP9P14780 707 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ZNF44P15621 663 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 PVALBP20472 110 aaPredicted RBP12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 UCP1P25874 307 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 RPL12P30050 165 aaKnown RBP12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 GNRHRP30968 328 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TIMP3P35625 211 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 PAX5Q02548 391 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 PSG7Q13046 419 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ZNF154Q13106 437 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SRSF6Q13247 344 aaKnown RBP12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ESPL1Q14674 2120 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 GNMTQ14749 295 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 PHLDA2Q53GA4 152 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 IGSF11Q5DX21 431 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 Q6P435 159 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 BRICD5Q6PL45 260 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ZNF497Q6ZNH5 498 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 UBAC2Q8NBM4 344 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 OR5D13Q8NGL4 314 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms