RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 DPCDQ9BVM2 203 aaPredicted RBP15.25■□□□□ 0.03
PTCD3-204ENST00000418628 CST11Q9H112 138 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 KCNK15Q9H427 330 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 UBE2J1Q9Y385 318 aaPredicted RBP15.25■□□□□ 0.03
PTCD3-204ENST00000418628 SOX21Q9Y651 276 aaPredicted RBP15.25■□□□□ 0.03
PTCD3-204ENST00000418628 ODAMA1E959 279 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 TCF21O43680 179 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 OR7C1O76099 320 aaPredicted RBP15.24■□□□□ 0.03
PTCD3-204ENST00000418628 FPR2P25090 351 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 GLIPR1P48060 266 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 GUCA2AQ02747 115 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 SCN1BQ07699 218 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 TAF9Q16594 264 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 GAPTQ8N292 157 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 BPIFB2Q8N4F0 458 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 PIP4P2Q8N4L2 257 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 ZNF714Q96N38 554 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 TM2D1Q9BX74 207 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 SUCNR1Q9BXA5 334 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 OR51E2Q9H255 320 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 BANF2Q9H503 90 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 FBLN5Q9UBX5 448 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 V9GY05 133 aa15.24■□□□□ 0.03
PTCD3-204ENST00000418628 FUOMA2VDF0 154 aa15.23■□□□□ 0.03
PTCD3-204ENST00000418628 LDLRAD4O15165 306 aa15.23■□□□□ 0.03
PTCD3-204ENST00000418628 CRTAPO75718 401 aaPredicted RBP15.23■□□□□ 0.03
PTCD3-204ENST00000418628 VENTXO95231 258 aa15.23■□□□□ 0.03
PTCD3-204ENST00000418628 CGB3P0DN86 165 aa15.23■□□□□ 0.03
PTCD3-204ENST00000418628 CGB7P0DN87 165 aa15.23■□□□□ 0.03
PTCD3-204ENST00000418628 UBE2E1P51965 193 aa15.23■□□□□ 0.03
PTCD3-204ENST00000418628 RPS27AP62979 156 aaKnown RBP15.23■□□□□ 0.03
PTCD3-204ENST00000418628 PRB3Q04118 309 aaPredicted RBP15.23■□□□□ 0.03
PTCD3-204ENST00000418628 BLMHQ13867 455 aa15.23■□□□□ 0.03
PTCD3-204ENST00000418628 KRBOX4Q5JUW0 171 aa15.23■□□□□ 0.03
PTCD3-204ENST00000418628 OR2W3Q7Z3T1 314 aa15.23■□□□□ 0.03
PTCD3-204ENST00000418628 YIPF6Q96EC8 236 aa15.23■□□□□ 0.03
PTCD3-204ENST00000418628 SELENOIQ9C0D9 397 aa15.23■□□□□ 0.03
PTCD3-204ENST00000418628 MS4A7Q9GZW8 240 aaPredicted RBP15.23■□□□□ 0.03
PTCD3-204ENST00000418628 ESM1Q9NQ30 184 aa15.23■□□□□ 0.03
PTCD3-204ENST00000418628 TAS2R3Q9NYW6 316 aa15.23■□□□□ 0.03
PTCD3-204ENST00000418628 MEX3AA1L020 520 aaKnown RBP15.22■□□□□ 0.03
PTCD3-204ENST00000418628 HSPB6O14558 160 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 CLPXO76031 633 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 IGHV1-8P0DP01 117 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 CD36P16671 472 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 GADD45AP24522 165 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 MYL9P24844 172 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 PSMD7P51665 324 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 OR10A3P58181 314 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 ERVFRD-1P60508 538 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 OR10K2Q6IF99 312 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 SIGLECL1Q8N7X8 197 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 ZDHHC22Q8N966 263 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 KCNG3Q8TAE7 436 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 ZNF418Q8TF45 676 aaPredicted RBP15.22■□□□□ 0.03
PTCD3-204ENST00000418628 FAM46BQ96A09 425 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 AJUBAQ96IF1 538 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 TMEM59Q9BXS4 323 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 LINC00574Q9H8X3 128 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 SPACA1Q9HBV2 294 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 KIF25Q9UIL4 384 aa15.22■□□□□ 0.03
PTCD3-204ENST00000418628 FOXI3A8MTJ6 420 aaPredicted RBP15.21■□□□□ 0.03
PTCD3-204ENST00000418628 ODF3BA8MYP8 253 aa15.21■□□□□ 0.03
PTCD3-204ENST00000418628 PDCD5O14737 125 aa15.21■□□□□ 0.03
PTCD3-204ENST00000418628 GLAP06280 429 aa15.21■□□□□ 0.03
PTCD3-204ENST00000418628 RAB11BQ15907 218 aa15.21■□□□□ 0.03
PTCD3-204ENST00000418628 SLC35E4Q6ICL7 350 aa15.21■□□□□ 0.03
PTCD3-204ENST00000418628 CYYR1Q96J86 154 aa15.21■□□□□ 0.03
PTCD3-204ENST00000418628 OCEL1Q9H607 264 aa15.21■□□□□ 0.03
PTCD3-204ENST00000418628 PLGRKTQ9HBL7 147 aa15.21■□□□□ 0.03
PTCD3-204ENST00000418628 VCX3AQ9NNX9 186 aa15.21■□□□□ 0.03
PTCD3-204ENST00000418628 STEAP1Q9UHE8 339 aa15.21■□□□□ 0.03
PTCD3-204ENST00000418628 SSR3Q9UNL2 185 aa15.21■□□□□ 0.03
PTCD3-204ENST00000418628 TRGV10A0A0A0MS01 117 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 A0A0A6YYD4 124 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 MDFIC2A0A1B0GVS7 189 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 hCG_1809904A0A1W2PP81 198 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 A0A1W2PPE2 198 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 A0A1W2PR64 198 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 A0A1W2PRV1 198 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 IFITM5A6NNB3 132 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 AIPO00170 330 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 NPFFO15130 113 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 MPIG6BO95866 241 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 RAB3BP20337 219 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 P2RY14Q15391 338 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 C17orf58Q2M2W7 97 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 DEFB112Q30KQ8 113 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 HEPN1Q6WQI6 88 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 LDLRAD3Q86YD5 345 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 PDZD9Q8IXQ8 264 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 FAM89BQ8N5H3 189 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 OR13A1Q8NGR1 328 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 NICN1Q9BSH3 213 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 BARHL1Q9BZE3 327 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 LPAR5Q9H1C0 372 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 OR6C3Q9NZP0 311 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 STAB1Q9NY15 2570 aa15.2■□□□□ 0.02
PTCD3-204ENST00000418628 ZNF729A6NN14 1252 aaPredicted RBP15.19■□□□□ 0.02
PTCD3-204ENST00000418628 CLDN34H7C241 214 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms