RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 CD96P40200 585 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 DCAF10Q5QP82 559 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 GSTZ1O43708 216 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-205ENST00000418258 SFTA3P0C7M3 94 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 HIST1H1EP10412 219 aaKnown RBP9.89□□□□□ -0.83
PTCH1-205ENST00000418258 PLAURQ03405 335 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 C19orf48Q6RUI8 117 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 LIAT1Q6ZQX7 453 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 SLC6A13Q9NSD5 602 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 C9orf170A2RU37 121 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 GFRA3O60609 400 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 NQO2P16083 231 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 SLC35B1P78383 322 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 PRSS42Q7Z5A4 293 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 OR10G4Q8NGN3 311 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 OR10G9Q8NGN4 311 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 OR10G7Q8NGN6 311 aa9.89□□□□□ -0.83
PTCH1-205ENST00000418258 EAF1Q96JC9 268 aaPredicted RBP9.89□□□□□ -0.83
PTCH1-205ENST00000418258 RHBDL1O75783 438 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 CST2P09228 141 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 VDAC1P21796 283 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 TMEM116Q8NCL8 245 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 P2RX4Q99571 388 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 DOCK9Q9BZ29 2069 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 UBE2L6O14933 153 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 LOXL3P58215 753 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 INSL4Q14641 139 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 ETFDHQ16134 617 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 GUCA2BQ16661 112 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 CCDC144NLQ6NUI1 221 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 DHRS11Q6UWP2 260 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 D2HGDHQ8N465 521 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 YIPF6Q96EC8 236 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 MAP6Q96JE9 813 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 PIPOXQ9P0Z9 390 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 GEMIN2O14893 280 aaKnown RBP9.88□□□□□ -0.83
PTCH1-205ENST00000418258 CTAG2O75638 210 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 OR10A7Q8NGE5 316 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 IL22RA2Q969J5 263 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 NTNG2Q96CW9 530 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 SF3B5Q9BWJ5 86 aaKnown RBP9.88□□□□□ -0.83
PTCH1-205ENST00000418258 PARP11Q9NR21 331 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 LPAR3Q9UBY5 353 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 TRIOBPQ9H2D6 2365 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 ICMTO60725 284 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 MMP24Q9Y5R2 645 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 FCN1O00602 326 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 FTH1P19P0C7X4 201 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 IZUMO4Q1ZYL8 232 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 ZNF426Q9BUY5 554 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 DUSP21Q9H596 190 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 HILPDAQ9Y5L2 63 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 MED19A0JLT2 244 aaPredicted RBP9.88□□□□□ -0.83
PTCH1-205ENST00000418258 PTHLHP12272 177 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 GPR6P46095 362 aaPredicted RBP9.88□□□□□ -0.83
PTCH1-205ENST00000418258 REG1BP48304 166 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 TMEM241Q24JQ0 296 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 ZNF66Q6ZN08 573 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 PARD6AQ9NPB6 346 aa9.88□□□□□ -0.83
PTCH1-205ENST00000418258 MRPS18BQ9Y676 258 aaKnown RBP9.88□□□□□ -0.83
PTCH1-205ENST00000418258 FAM87AP0C7U9 286 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 RANP62826 216 aaKnown RBP9.87□□□□□ -0.83
PTCH1-205ENST00000418258 MMDQ15546 238 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 FADS6Q8N9I5 356 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 SLC26A10Q8NG04 563 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 PERPQ96FX8 193 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 XIRP1Q702N8 1843 aaKnown RBP9.87□□□□□ -0.83
PTCH1-205ENST00000418258 FAM24AA6NFZ4 105 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 LIPT2A6NK58 231 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 PRSS1P07477 247 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 CLPPQ16740 277 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-205ENST00000418258 INO80CQ6PI98 192 aaPredicted RBP9.87□□□□□ -0.83
PTCH1-205ENST00000418258 SMIM12Q96EX1 92 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 RPL31P62899 125 aaKnown RBP9.87□□□□□ -0.83
PTCH1-205ENST00000418258 AESQ08117 197 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 PIMREGQ9BSJ6 248 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 STARD10Q9Y365 291 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 PTBP3O95758 552 aaKnown RBP9.87□□□□□ -0.83
PTCH1-205ENST00000418258 C19orf57Q0VDD7 668 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 PPP1R1AQ13522 171 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 ADAMTS17Q8TE56 1095 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 TMEM37Q8WXS4 190 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 UCN2Q96RP3 112 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 SIRT5Q9NXA8 310 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 U3KQ87 197 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 IGHV3-21A0A0B4J1V1 117 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 MAP1LC3B2A6NCE7 125 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 LSM6P62312 80 aaKnown RBP9.87□□□□□ -0.83
PTCH1-205ENST00000418258 C1orf53Q5VUE5 145 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 C12orf73Q69YU5 71 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 FAM219AQ8IW50 185 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 GVQW1Q8N7I0 195 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 MAP1LC3BQ9GZQ8 125 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 PEX11BO96011 259 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 CD1BP29016 333 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 PMELP40967 661 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 GUK1Q16774 197 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 GAB4Q2WGN9 574 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 MOGAT2Q3SYC2 334 aa9.87□□□□□ -0.83
PTCH1-205ENST00000418258 GLDNQ6ZMI3 551 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms