RNA–Protein interactions for RNA: ENST00000418132.7

CASC3-203, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 1 (best)

Gene CASC3, Length 1,986 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-203ENST00000418132 RBMS2Q15434 407 aaKnown RBP17.48■□□□□ 0.39
CASC3-203ENST00000418132 METTL11BQ5VVY1 283 aa17.48■□□□□ 0.39
CASC3-203ENST00000418132 SHEQ5VZ18 495 aa17.48■□□□□ 0.39
CASC3-203ENST00000418132 Q6ZPA2 131 aa17.48■□□□□ 0.39
CASC3-203ENST00000418132 OR5AP2Q8NGF4 316 aa17.48■□□□□ 0.39
CASC3-203ENST00000418132 NEK7Q8TDX7 302 aa17.48■□□□□ 0.39
CASC3-203ENST00000418132 DYNLRB1Q9NP97 96 aa17.48■□□□□ 0.39
CASC3-203ENST00000418132 SIRPB1O00241 398 aa17.47■□□□□ 0.39
CASC3-203ENST00000418132 ANXA7P20073 488 aaKnown RBP17.47■□□□□ 0.39
CASC3-203ENST00000418132 ZFAND1Q8TCF1 268 aa17.47■□□□□ 0.39
CASC3-203ENST00000418132 EGLN1Q9GZT9 426 aa17.47■□□□□ 0.39
CASC3-203ENST00000418132 SEBOXQ9HB31 216 aaPredicted RBP17.47■□□□□ 0.39
CASC3-203ENST00000418132 RNF7Q9UBF6 113 aa17.47■□□□□ 0.39
CASC3-203ENST00000418132 OR14J1Q9UGF5 321 aa17.47■□□□□ 0.39
CASC3-203ENST00000418132 ANXA10Q9UJ72 324 aa17.47■□□□□ 0.39
CASC3-203ENST00000418132 SCP2D1Q9UJQ7 156 aa17.47■□□□□ 0.39
CASC3-203ENST00000418132 PPP1R3CQ9UQK1 317 aa17.47■□□□□ 0.39
CASC3-203ENST00000418132 NPTNQ9Y639 398 aa17.47■□□□□ 0.39
CASC3-203ENST00000418132 ARFGEF3Q5TH69 2177 aa17.47■□□□□ 0.39
CASC3-203ENST00000418132 IFNL4K9M1U5 179 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 ANXA3P12429 323 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 MECP2P51608 486 aaKnown RBP17.46■□□□□ 0.39
CASC3-203ENST00000418132 ZMYND11Q15326 602 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 PAN3Q58A45 887 aaKnown RBP17.46■□□□□ 0.39
CASC3-203ENST00000418132 GLDNQ6ZMI3 551 aaPredicted RBP17.46■□□□□ 0.39
CASC3-203ENST00000418132 OR5H2Q8NGV7 314 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 SEC22CQ9BRL7 303 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 GINS4Q9BRT9 223 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 RIMS4Q9H426 269 aaPredicted RBP17.46■□□□□ 0.39
CASC3-203ENST00000418132 TREM2Q9NZC2 230 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 USP9XQ93008 2570 aaPredicted RBP17.46■□□□□ 0.39
CASC3-203ENST00000418132 PYCARD-AS1I3L0S3 204 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 CSN2P05814 226 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 CEBPDP49716 269 aaPredicted RBP17.46■□□□□ 0.39
CASC3-203ENST00000418132 SRSF7Q16629 238 aaKnown RBP eCLIP17.46■□□□□ 0.39
CASC3-203ENST00000418132 IDO2Q6ZQW0 420 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 Q6ZS49 121 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 ARRDC1Q8N5I2 433 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 ASCC1Q8N9N2 400 aaKnown RBP17.46■□□□□ 0.39
CASC3-203ENST00000418132 OR11L1Q8NGX0 322 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 PRRT1Q99946 306 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 SAP30LQ9HAJ7 183 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 DECR2Q9NUI1 292 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 WIPI2Q9Y4P8 454 aa17.46■□□□□ 0.39
CASC3-203ENST00000418132 MEIKINA0A087WXM9 373 aa17.45■□□□□ 0.38
CASC3-203ENST00000418132 RFPL4AA6NLU0 287 aa17.45■□□□□ 0.38
CASC3-203ENST00000418132 RFPL4AL1F8VTS6 287 aa17.45■□□□□ 0.38
CASC3-203ENST00000418132 IFNA6P05013 189 aa17.45■□□□□ 0.38
CASC3-203ENST00000418132 MDH2P40926 338 aaKnown RBP17.45■□□□□ 0.38
CASC3-203ENST00000418132 CHRFAM7AQ494W8 412 aa17.45■□□□□ 0.38
CASC3-203ENST00000418132 MED30Q96HR3 178 aa17.45■□□□□ 0.38
CASC3-203ENST00000418132 HYLS1Q96M11 299 aa17.45■□□□□ 0.38
CASC3-203ENST00000418132 SLC25A21Q9BQT8 299 aaPredicted RBP17.45■□□□□ 0.38
CASC3-203ENST00000418132 CHMP1AQ9HD42 196 aaPredicted RBP17.45■□□□□ 0.38
CASC3-203ENST00000418132 TRBV6-6A0A0A6YYG2 114 aa17.44■□□□□ 0.38
CASC3-203ENST00000418132 PSG2P11465 335 aa17.44■□□□□ 0.38
CASC3-203ENST00000418132 OR3A3P47888 321 aa17.44■□□□□ 0.38
CASC3-203ENST00000418132 OVCH2Q7RTZ1 564 aa17.44■□□□□ 0.38
CASC3-203ENST00000418132 ZNF286AQ9HBT8 521 aa17.44■□□□□ 0.38
CASC3-203ENST00000418132 TMEM165Q9HC07 324 aa17.44■□□□□ 0.38
CASC3-203ENST00000418132 DNAJB11Q9UBS4 358 aa17.44■□□□□ 0.38
CASC3-203ENST00000418132 DYSFO75923 2080 aa17.44■□□□□ 0.38
CASC3-203ENST00000418132 PSPNO60542 156 aa17.44■□□□□ 0.38
CASC3-203ENST00000418132 SNRPD2P62316 118 aaKnown RBP17.44■□□□□ 0.38
CASC3-203ENST00000418132 LAMTOR1Q6IAA8 161 aa17.44■□□□□ 0.38
CASC3-203ENST00000418132 GAPTQ8N292 157 aa17.44■□□□□ 0.38
CASC3-203ENST00000418132 BOLLQ8N9W6 283 aaKnown RBP17.44■□□□□ 0.38
CASC3-203ENST00000418132 OR13C8Q8NGS7 320 aa17.44■□□□□ 0.38
CASC3-203ENST00000418132 MRPL30Q8TCC3 161 aaKnown RBP17.44■□□□□ 0.38
CASC3-203ENST00000418132 Q9N2K0 584 aa17.44■□□□□ 0.38
CASC3-203ENST00000418132 OR2AT4A6NND4 320 aa17.43■□□□□ 0.38
CASC3-203ENST00000418132 POM121CA8CG34 1229 aa17.43■□□□□ 0.38
CASC3-203ENST00000418132 IL5P05113 134 aa17.43■□□□□ 0.38
CASC3-203ENST00000418132 GSTT2P0CG29 244 aa17.43■□□□□ 0.38
CASC3-203ENST00000418132 PRDX2P32119 198 aa17.43■□□□□ 0.38
CASC3-203ENST00000418132 SCGB2B2Q4G0G5 96 aa17.43■□□□□ 0.38
CASC3-203ENST00000418132 CD177Q8N6Q3 437 aa17.43■□□□□ 0.38
CASC3-203ENST00000418132 OR5T2Q8NGG2 359 aa17.43■□□□□ 0.38
CASC3-203ENST00000418132 PLPPR1Q8TBJ4 325 aa17.43■□□□□ 0.38
CASC3-203ENST00000418132 PPA2Q9H2U2 334 aa17.43■□□□□ 0.38
CASC3-203ENST00000418132 UBR5O95071 2799 aaPredicted RBP17.43■□□□□ 0.38
CASC3-203ENST00000418132 HRNRQ86YZ3 2850 aaPredicted RBP17.43■□□□□ 0.38
CASC3-203ENST00000418132 IGKV1D-17A0A075B6S4 117 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 CYB5R3P00387 301 aaPredicted RBP17.42■□□□□ 0.38
CASC3-203ENST00000418132 VSIG10L2P0DP72 767 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 ARPC4P59998 168 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 ZNF880Q6PDB4 577 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 ZNF497Q6ZNH5 498 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 TGIF2LYQ8IUE0 185 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 MRGPRFQ96AM1 343 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 RANBP3Q9H6Z4 567 aaPredicted RBP17.42■□□□□ 0.38
CASC3-203ENST00000418132 EHFQ9NZC4 300 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 ZNF69Q9UC07 566 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 H7C1Q1 480 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 RLN1P04808 185 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 RNF224P0DH78 156 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 IRF2P14316 349 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 COL10A1Q03692 680 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 GRK1Q15835 563 aa17.42■□□□□ 0.38
CASC3-203ENST00000418132 ZNF626Q68DY1 528 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms