RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 OR3A1P47881 315 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 P2RX3P56373 397 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 LMO4P61968 165 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 AESQ08117 197 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 PLA2G7Q13093 441 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 MADCAM1Q13477 382 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 IL18Q14116 193 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 TMEM249Q2WGJ8 235 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 CNPY1Q3B7I2 92 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 DCAF12L2Q5VW00 463 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 FOXB2Q5VYV0 432 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 BAIAP2L2Q6UXY1 529 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 KRTAP1-3Q8IUG1 177 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 LAX1Q8IWV1 398 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 IZUMO1Q8IYV9 350 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 TPRX1Q8N7U7 411 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 DTX3Q8N9I9 347 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 C15orf40Q8WUR7 153 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 SLC25A38Q96DW6 304 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 DIRAS2Q96HU8 199 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 CMSS1Q9BQ75 279 aaKnown RBP7.03□□□□□ -1.28
TRIM48-201ENST00000417545 FAAP24Q9BTP7 215 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 ZMAT3Q9HA38 289 aaKnown RBP7.03□□□□□ -1.28
TRIM48-201ENST00000417545 KCNIP1Q9NZI2 227 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 OR6C3Q9NZP0 311 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 HSF4Q9ULV5 492 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 UNC79Q9P2D8 2635 aa7.03□□□□□ -1.28
TRIM48-201ENST00000417545 A0A0A6YYD4 124 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 TRAV20A0A0B4J274 112 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 SERPINE3A8MV23 424 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 FAM157AC9JC47 383 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 ZNF737O75373 536 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 CA11O75493 328 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 TGFAP01135 160 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 CSN2P05814 226 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 LIPFP07098 398 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 GSTP1P09211 210 aaKnown RBP7.02□□□□□ -1.29
TRIM48-201ENST00000417545 CD99P14209 185 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 GNB3P16520 340 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 ELK1P19419 428 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 TAS2R20P59543 309 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 PITPNAQ00169 270 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 MOGAT2Q3SYC2 334 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 CDNFQ49AH0 187 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 SPANXN2Q5MJ10 180 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 C6orf183Q5T699 404 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 SLC35E4Q6ICL7 350 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 FAM131AQ6UXB0 335 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 C17orf107Q6ZR85 190 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 FGFRL1Q8N441 504 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 ZNF565Q8N9K5 539 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 OR4K15Q8NH41 348 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 CCDC107Q8WV48 283 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 DYRK2Q92630 601 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 C18orf12Q96KH6 178 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 SULT4A1Q9BR01 284 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 NUDT16L1Q9BRJ7 211 aaKnown RBP7.02□□□□□ -1.29
TRIM48-201ENST00000417545 DCTN5Q9BTE1 182 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 SLIRPQ9GZT3 109 aaKnown RBP7.02□□□□□ -1.29
TRIM48-201ENST00000417545 ABCG5Q9H222 651 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 GAL3ST2Q9H3Q3 398 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 C12orf4Q9NQ89 552 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 IFT46Q9NQC8 304 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 RCC2Q9P258 522 aaKnown RBP7.02□□□□□ -1.29
TRIM48-201ENST00000417545 AK3Q9UIJ7 227 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 KIF25Q9UIL4 384 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 DOCK11Q5JSL3 2073 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 CR1P17927 2039 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 TACC2O95359 2948 aa7.02□□□□□ -1.29
TRIM48-201ENST00000417545 A0A0G2JMP0 313 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 A0A0X1KG70 313 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 ODAMA1E959 279 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 MEX3AA1L020 520 aaKnown RBP7.01□□□□□ -1.29
TRIM48-201ENST00000417545 TMEM235A6NFC5 223 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 A8MXK9 166 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 CTDSP2O14595 271 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 TNFRSF13BO14836 293 aaPredicted RBP7.01□□□□□ -1.29
TRIM48-201ENST00000417545 XRCC3O43542 346 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 CLPXO76031 633 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 IGHV4-31P0DP07 118 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 AMY2BP19961 511 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 ERP29P30040 261 aaKnown RBP7.01□□□□□ -1.29
TRIM48-201ENST00000417545 GLIPR1P48060 266 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 MEF2CQ06413 473 aaPredicted RBP7.01□□□□□ -1.29
TRIM48-201ENST00000417545 PNLIPRP3Q17RR3 467 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 C11orf91Q3C1V1 193 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 RNASE12Q5GAN4 147 aaKnown RBP7.01□□□□□ -1.29
TRIM48-201ENST00000417545 METTL11BQ5VVY1 283 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 CNIH2Q6PI25 160 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 TRAT1Q6PIZ9 186 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 ZNF841Q6ZN19 808 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 MOB1BQ7L9L4 216 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 SNX29P2Q8IUI4 249 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 PRR18Q8N4B5 295 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 FAM89BQ8N5H3 189 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 OR4M2Q8NGB6 313 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 PLPPR1Q8TBJ4 325 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 TMEM186Q96B77 213 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 ZNF714Q96N38 554 aa7.01□□□□□ -1.29
TRIM48-201ENST00000417545 RIMS4Q9H426 269 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms